作者
Matthew D Whiteside, Geoffrey L Winsor, Matthew R Laird, Fiona SL Brinkman
发表日期
2013/1/1
期刊
Nucleic acids research
卷号
41
期号
D1
页码范围
D366-D376
出版商
Oxford University Press
简介
Prediction of orthologs (homologous genes that diverged because of speciation) is an integral component of many comparative genomics methods. Although orthologs are more likely to have similar function versus paralogs (genes that diverged because of duplication), recent studies have shown that their degree of functional conservation is variable. Also, there are inherent problems with several large-scale ortholog prediction approaches. To address these issues, we previously developed Ortholuge, which uses phylogenetic distance ratios to provide more precise ortholog assessments for a set of predicted orthologs. However, the original version of Ortholuge required manual intervention and was not easily accessible; therefore, we now report the development of OrtholugeDB, available online at http://www.pathogenomics.sfu.ca/ortholugedb. OrtholugeDB provides ortholog predictions for completely …
引用总数
201220132014201520162017201820192020202120222023202411117131161387641
学术搜索中的文章