作者
Stéphane Uroz, Marc Buée, Claude Murat, Pascale Frey‐Klett, Francis Martin
发表日期
2010/4
期刊
Environmental microbiology reports
卷号
2
期号
2
页码范围
281-288
出版商
Blackwell Publishing Ltd
简介
Several reports have highlighted that forest soil samples are more phylum‐rich than agricultural soil samples. However, little is known about the structure and richness of the bacterial communities in forest soil. Using high‐throughput next generation 454 pyrosequencing, we deeply investigated the diversity of bacterial communities colonizing the oak rhizosphere niche and the surrounding soil. From three spatially independent soil samples, we obtained over 300 000 partial 16S rRNA gene sequences. The most abundant bacterial groups were the Acidobacteria, Proteobacteria and unclassified bacteria. Multifactorial analysis of the relative proportions of the different phyla revealed a net differentiation of the bacterial communities present in the rhizosphere and soil environments, suggesting an oak rhizosphere effect. Significantly more β‐, γ‐ and unclassified Proteobacteria inhabited the rhizosphere when …
引用总数
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