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The cholinergic system is one of the most influential and essential signalling systems in the body. In the brain, cholinergic neurons innervate many brain regions where they influence a wide variety of behaviours. However, the precise role of each cholinergic region on distinct types of behaviour is not well known. Furthermore, in recent years there has been evidence that many cholinergic neurons in the brain have a capacity for co-transmission. Yet the functional significance of secreting two classical neurotransmitters from the same neuron is still largely unidentified. In this thesis, we investigated how different cholinergic nuclei modulate behavioural functions. To do that we selectively eliminated acetylcholine (ACh) release from cholinergic neurons of the striatum, brainstem and basal forebrain in mice. We then evaluated cognitive and non-cognitive behaviours using classical behavioural tests as well as …