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The United States (U.S.) has faced major environmental changes in recent decades, including agricultural intensification and urban expansion, as well as changes in atmospheric deposition and climate—all of which may influence eutrophication of freshwaters. However, it is unclear whether or how water quality in lakes across diverse ecological settings has responded to environmental change. We quantified water quality trends in 2913 lakes using nutrient and chlorophyll (Chl) observations from the Lake Multi‐Scaled Geospatial and Temporal Database of the Northeast U.S. (LAGOS‐NE), a collection of preexisting lake data mostly from state agencies. LAGOS‐NE was used to quantify whether lake water quality has changed from 1990 to 2013, and whether lake‐specific or regional geophysical factors were related to the observed changes. We modeled change through time using hierarchical linear models for …