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Seagrass meadows are among the most efficient and long-term carbon sinks on earth, but disturbances could threaten this capacity, so understanding the impacts of disturbance on carbon stored within seagrass meadows—‘blue carbon’—is of prime importance. To date, there have been no published studies on the impacts of seagrass loss on ‘blue carbon’ stocks. We experimentally created several kinds of small-scale disturbances, representative of common grazer and boating impacts, within seagrass (Zostera nigracaulis) meadows in Port Phillip Bay (Australia) and measured the impacts on sediment organic carbon stocks (‘C _org’, and other geochemical variables—%N, δ¹³C, δ¹⁵N). Disturbance had no detectable effect on C _org levels within seagrass sediments, even for high-intensity disturbance treatments, which remained bare (i.e. no seagrass recovery) for 2 years after the …