作者
Baha Abdalhamid, Christopher R Bilder, Emily L McCutchen, Steven H Hinrichs, Scott A Koepsell, Peter C Iwen
发表日期
2020/5/5
期刊
American journal of clinical pathology
卷号
153
期号
6
页码范围
715-718
出版商
Oxford University Press
简介
Objectives
To establish the optimal parameters for group testing of pooled specimens for the detection of SARS-CoV-2.
Methods
The most efficient pool size was determined to be five specimens using a web-based application. From this analysis, 25 experimental pools were created using 50 µL from one SARS-CoV-2 positive nasopharyngeal specimen mixed with 4 negative patient specimens (50 µL each) for a total volume of 250 µL. Viral RNA was subsequently extracted from each pool and tested using the CDC SARS-CoV-2 RT-PCR assay. Positive pools were consequently split into individual specimens and tested by extraction and PCR. This method was also tested on an unselected group of 60 nasopharyngeal specimens grouped into 12 pools.
Results
All 25 pools were positive with cycle threshold (Ct) values within 0 and 5.03 Ct of the original …
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B Abdalhamid, CR Bilder, EL McCutchen, SH Hinrichs… - American journal of clinical pathology, 2020