作者
Luciana Capece, Leonardo Boechi, Laura L Perissinotti, Pau Arroyo-Mañez, Damián E Bikiel, Giulietta Smulevich, Marcelo A Marti, Dario A Estrin
发表日期
2013/9/1
来源
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics
卷号
1834
期号
9
页码范围
1722-1738
出版商
Elsevier
简介
In this work we review the application of classical and quantum-mechanical atomistic computer simulation tools to the investigation of small ligand interaction with globins. In the first part, studies of ligand migration, with its connection to kinetic association rate constants (kon), are presented. In the second part, we review studies for a variety of ligands such as O2, NO, CO, HS, F, and NO2 showing how the heme structure, proximal effects, and the interactions with the distal amino acids can modulate proteinsingle bondligand binding. The review presents mainly results derived from our previous works on the subject, in the context of other theoretical and experimental studies performed by others. The variety and extent of the presented data yield a clear example of how computer simulation tools have, in the last decade, contributed to our deeper understanding of small ligand interactions with globins. This article is …
引用总数
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L Capece, L Boechi, LL Perissinotti, P Arroyo-Mañez… - Biochimica et Biophysica Acta (BBA)-Proteins and …, 2013