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A novel α2,9-linked polysialic acid (polySia)-containing glycoprotein of sea urchin sperm flagella was identified and named “flagellasialin.“ Flagellasialin from Hemicentrotus pulcherrimus shows a diverse relative molecular mass on sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS–PAGE) of 40–80 kDa. Flagellasialin is a 96-amino acid, threonine-rich, heavily O-glycosylated (80–90% by weight) glycoprotein with a single transmembrane segment at its C-terminus and no apparent cytosolic domain. Of 12 extracellular Thr residues, eight are O-glycosylated and three are nonglycosylated. Flagellasialin is highly expressed in the testis but cannot be detected in the ovary. The amino acid sequences of flagellasialin from three sea urchin species (H. pulcherrimus, Strongylocentrotus purpuratus, and Strongylocentrotus franciscanus) are identical, but some species differences exist in the three core …