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We take advantage of next generation sequencingbased technology to assess how landscapelevel dynamics, biogeographical history and functional factors shape the distribution of genetic diversity in rain forest trees. To achieve this, we explore chloroplast genomic diversity and divergence patterns across multiple, codistributed species from three major centres of rain forest diversity.

Subtropical rain forests in southeastern Australia: Nightcap–Border Ranges, Dorrigo and Washpool.

We assembled chloroplast genomic data from wholegenome shotgun libraries for 71 species collected across three major centres of rain forest diversity. Chloroplast single nucleotide polymorphisms were used to measure genetic variation within and between multiple populations, species and locations, and we used this information to identify patterns related to landscapelevel processes …