作者
Manfred Bohn, Dieter W Heermann, Roel van Driel
发表日期
2007/11
期刊
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics
卷号
76
期号
5
页码范围
051805
出版商
American Physical Society
简介
Remarkably little is known about the higher-order folding motifs of the chromatin fiber inside the cell nucleus. Folding depends among others on local gene density and transcriptional activity and plays an important role in gene regulation. Strikingly, at fiber lengths above the measured mean square distance between any two points on the chromatin fiber is independent of polymer length. We propose a polymer model that can explain this leveling-off by means of random looping. We derive an analytical expression for the mean square displacement between two arbitrary beads. Here the average is taken over the thermal ensemble with a fixed but random loop configuration, while quenched averaging over the ensemble of different loop configurations—which turns out to be equivalent to averaging over an ensemble of random matrices—is performed numerically. A detailed investigation of this model …
引用总数
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学术搜索中的文章
M Bohn, DW Heermann, R van Driel - Physical Review E—Statistical, Nonlinear, and Soft …, 2007