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Transcriptomic analysis was used to investigate the antibacterial mechanism of phenolic compounds from kefir fermented soy whey (FSP) against Escherichia coli 0157:H7 and Listeria monocytogenes. The kefir fermentation increased the concentration of several phenolic aglycones with proven antibacterial efficacy in the FSP. The time-kill curve showed that 2× MICs of the FSP killed >99.9 % of the strains within 2 h of exposure. The checkerboard fractional inhibition concentration (FIC) assay proved that phenolics were the sole antibacterial agent in the FSP. The transmission electron microscope (TEM) photomicrograph corroborated the propidium iodide (PI) uptake, protein, and nucleic acid leakage assays. They demonstrated that the phenolics permeated the cell membrane, disrupted the cytoplasm, and caused cell lysis in the treated cells leading to protein and nucleic acid leakage. The transcriptome analysis …