作者
Brajesh K Rai, Vishnu Sresht, Qingyi Yang, Ray Unwalla, Meihua Tu, Alan M Mathiowetz, Gregory A Bakken
发表日期
2022/2/4
期刊
Journal of Chemical Information and Modeling
卷号
62
期号
4
页码范围
785-800
出版商
American Chemical Society
简介
Fast and accurate assessment of small-molecule dihedral energetics is crucial for molecular design and optimization in medicinal chemistry. Yet, accurate prediction of torsion energy profiles remains challenging as the current molecular mechanics (MM) methods are limited by insufficient coverage of drug-like chemical space and accurate quantum mechanical (QM) methods are too expensive. To address this limitation, we introduce TorsionNet, a deep neural network (DNN) model specifically developed to predict small-molecule torsion energy profiles with QM-level accuracy. We applied active learning to identify nearly 50k fragments (with elements H, C, N, O, F, S, and Cl) that maximized the coverage of our corporate compound library and leveraged massively parallel cloud computing resources for density functional theory (DFT) torsion scans of these fragments, generating a training data set of 1.2 million DFT …
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