作者
Sara Zanivan, Florian Gnad, Sara A Wickström, Tami Geiger, Boris Macek, Jürgen Cox, Reinhard Fässler, Matthias Mann
发表日期
2008/12/5
期刊
Journal of proteome research
卷号
7
期号
12
页码范围
5314-5326
出版商
American Chemical Society
简介
Kinases play a prominent role in tumor development, pointing to the presence of specific phosphorylation patterns in tumor tissues. Here, we investigate whether recently developed high resolution mass spectrometric (MS) methods for proteome and phosphoproteome analysis can also be applied to solid tumors. As tumor model, we used TG3 mutant mice carrying skin melanomas. At total of 100 μg of solid tumor lysate yielded a melanoma proteome of 4443 identified proteins, including at least 88 putative melanoma markers previously found by cDNA microarray technology. Analysis of 2 mg of lysate from dissected melanoma with titansphere chromatography and 8 mg with strong cation exchange together resulted in the identification of more than 5600 phosphorylation sites on 2250 proteins. The phosphoproteome included many hits from pathways important in melanoma. One-month storage at −80 °C did not …
引用总数
2009201020112012201320142015201620172018201920202021202220232024123714212016123119961222
学术搜索中的文章
S Zanivan, F Gnad, SA Wickström, T Geiger, B Macek… - Journal of proteome research, 2008