作者
Diego CB Mariano, Felipe L Pereira, Edgar L Aguiar, Letícia C Oliveira, Leandro Benevides, Luís C Guimarães, Edson L Folador, Thiago J Sousa, Preetam Ghosh, Debmalya Barh, Henrique CP Figueiredo, Artur Silva, Rommel TJ Ramos, Vasco AC Azevedo
发表日期
2016/12
期刊
BMC bioinformatics
卷号
17
页码范围
65-72
出版商
BioMed Central
简介
Background
The evolution of Next-Generation Sequencing (NGS) has considerably reduced the cost per sequenced-base, allowing a significant rise of sequencing projects, mainly in prokaryotes. However, the range of available NGS platforms requires different strategies and software to correctly assemble genomes. Different strategies are necessary to properly complete an assembly project, in addition to the installation or modification of various software. This requires users to have significant expertise in these software and command line scripting experience on Unix platforms, besides possessing the basic expertise on methodologies and techniques for genome assembly. These difficulties often delay the complete genome assembly projects.
Results
In order to overcome this, we developed SIMBA (SImple Manager for Bacterial Assemblies), a freely …
学术搜索中的文章
DCB Mariano, FL Pereira, EL Aguiar, LC Oliveira… - BMC bioinformatics, 2016
