作者
Joanna Poźniak, Jérémie Nsengimana, Jonathan P Laye, Sally J O’Shea, Joey Mark S Diaz, Alastair P Droop, Anastasia Filia, Mark Harland, John R Davies, Tracey Mell, Juliette A Randerson-Moor, Sathya Muralidhar, Sabrina A Hogan, Sandra Nicole Freiberger, Mitchell P Levesque, Graham P Cook, D Timothy Bishop, Julia Newton-Bishop
发表日期
2019/5/15
期刊
Cancer research
卷号
79
期号
10
页码范围
2684-2696
出版商
American Association for Cancer Research
简介
The immune response to melanoma improves the survival in untreated patients and predicts the response to immune checkpoint blockade. Here, we report genetic and environmental predictors of the immune response in a large primary cutaneous melanoma cohort. Bioinformatic analysis of 703 tumor transcriptomes was used to infer immune cell infiltration and to categorize tumors into immune subgroups, which were then investigated for association with biological pathways, clinicopathologic factors, and copy number alterations. Three subgroups, with “low”, “intermediate”, and “high” immune signals, were identified in primary tumors and replicated in metastatic tumors. Genes in the low subgroup were enriched for cell-cycle and metabolic pathways, whereas genes in the high subgroup were enriched for IFN and NF-κB signaling. We identified high MYC expression partially driven by amplification …
引用总数
20192020202120222023202481691155
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