作者
Vanika Garg, Olga Dudchenko, Jinpeng Wang, Aamir W Khan, Saurabh Gupta, Parwinder Kaur, Kai Han, Rachit K Saxena, Sandip M Kale, Melanie Pham, Jigao Yu, Annapurna Chitikineni, Zhikang Zhang, Guangyi Fan, Christopher Lui, Vinodkumar Valluri, Fanbo Meng, Aditi Bhandari, Xiaochuan Liu, Tao Yang, Hua Chen, Babu Valliyodan, Manish Roorkiwal, Chengcheng Shi, Hong Bin Yang, Neva C Durand, Manish K Pandey, Guowei Li, Rutwik Barmukh, Xingjun Wang, Xiaoping Chen, Hon-Ming Lam, Huifang Jiang, Xuxiao Zong, Xuanqiang Liang, Xin Liu, Boshou Liao, Baozhu Guo, Scott Jackson, Henry T Nguyen, Weijian Zhuang, Wan Shubo, Xiyin Wang, Erez Lieberman Aiden, Jeffrey L Bennetzen, Rajeev K Varshney
发表日期
2022/12/1
期刊
Journal of advanced research
卷号
42
页码范围
315-329
出版商
Elsevier
简介
Introduction
Legume crops are an important source of protein and oil for human health and in fixing atmospheric N2 for soil enrichment. With an objective to accelerate much-needed genetic analyses and breeding applications, draft genome assemblies were generated in several legume crops; many of them are not high quality because they are mainly based on short reads. However, the superior quality of genome assembly is crucial for a detailed understanding of genomic architecture, genome evolution, and crop improvement.
Objectives
Present study was undertaken with an objective of developing improved chromosome-length genome assemblies in six different legumes followed by their systematic investigation to unravel different aspects of genome organization and legume evolution.
Methods
We employed in situ Hi-C data to improve the existing draft genomes and performed different evolutionary and …
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V Garg, O Dudchenko, J Wang, AW Khan, S Gupta… - Journal of advanced research, 2022