作者
Ya-Long Xu, Peng He, Lan Zhang, Shao-Qing Fang, Shuang-Lin Dong, Yong-Jun Zhang, Fei Li
发表日期
2009/12/25
期刊
Bmc Genomics
卷号
10
期号
1
页码范围
632
出版商
BioMed Central Ltd
简介
Background
Insect odorant binding proteins (OBPs) and chemosensory proteins (CSPs) play an important role in chemical communication of insects. Gene discovery of these proteins is a time-consuming task. In recent years, expressed sequence tags (ESTs) of many insect species have accumulated, thus providing a useful resource for gene discovery.
Results
We have developed a computational pipeline to identify OBP and CSP genes from insect ESTs. In total, 752,841 insect ESTs were examined from 54 species covering eight Orders of Insecta. From these ESTs, 142 OBPs and 177 CSPs were identified, of which 117 OBPs and 129 CSPs are new. The complete open reading frames (ORFs) of 88 OBPs and 123 CSPs were obtained by electronic elongation. We randomly chose 26 OBPs from eight species of insects, and 21 CSPs from four species for …
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