作者
Quanfu Fan, Yilai Li, Yuguang Yao, John Cohn, Sijia Liu, Ziping Xu, Seychelle Vos, Michael Cianfrocco
发表日期
2024
研讨会论文
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision
页码范围
7892-7902
简介
Single-particle cryo-electron microscopy (cryo-EM) has become one of the mainstream structural biology techniques because of its ability to determine high-resolution structures of dynamic bio-molecules. However, cryo-EM data acquisition remains expensive and labor-intensive, requiring substantial expertise. Structural biologists need a more efficient and objective method to collect the best data in a limited time frame. We formulate the cryo-EM data collection task as an optimization problem in this work. The goal is to maximize the total number of good images taken within a specified period. We show that reinforcement learning offers an effective way to plan cryo-EM data collection, successfully navigating heterogenous cryo-EM grids. The approach we developed, cryoRL, demonstrates better performance than average users for data collection under similar settings.
引用总数
学术搜索中的文章
Q Fan, Y Li, Y Yao, J Cohn, S Liu, Z Xu, S Vos… - Proceedings of the IEEE/CVF Winter Conference on …, 2024