作者
Christopher D Steele, Matthew Greenhalgh, David J Balding
发表日期
2016/10/1
期刊
Statistical applications in genetics and molecular biology
卷号
15
期号
5
页码范围
431-445
出版商
De Gruyter
简介
In recent years statistical models for the analysis of complex (low-template and/or mixed) DNA profiles have moved from using only presence/absence information about allelic peaks in an electropherogram, to quantitative use of peak heights. This is challenging because peak heights are very variable and affected by a number of factors. We present a new peak-height model with important novel features, including over- and double-stutter, and a new approach to dropin. Our model is incorporated in open-source R code likeLTD. We apply it to 108 laboratory-generated crime-scene profiles and demonstrate techniques of model validation that are novel in the field. We use the results to explore the benefits of modeling peak heights, finding that it is not always advantageous, and to assess the merits of pre-extraction replication. We also introduce an approximation that can reduce computational complexity when there …
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学术搜索中的文章
CD Steele, M Greenhalgh, DJ Balding - Statistical applications in genetics and molecular …, 2016