作者
Allan B James, Cristiane PG Calixto, Nikoleta A Tzioutziou, Wenbin Guo, Runxuan Zhang, Craig G Simpson, Wenying Jiang, Gillian A Nimmo, John WS Brown, Hugh G Nimmo
发表日期
2018/7
期刊
Plant, cell & environment
卷号
41
期号
7
页码范围
1539-1550
简介
One of the ways in which plants can respond to temperature is via alternative splicing (AS). Previous work showed that temperature changes affected the splicing of several circadian clock gene transcripts. Here, we investigated the role of RNA‐binding splicing factors (SFs) in temperature‐sensitive AS of the clock gene LATE ELONGATED HYPOCOTYL (LHY). We characterized, in wild type plants, temperature‐associated isoform switching and expression patterns for SF transcripts from a high‐resolution temperature and time series RNA‐seq experiment. In addition, we employed quantitative RT‐PCR of SF mutant plants to explore the role of the SFs in cooling‐associated AS of LHY. We show that the splicing and expression of several SFs responds sufficiently, rapidly, and sensitively to temperature changes to contribute to the splicing of the 5′UTR of LHY. Moreover, the choice of splice site in LHY was altered in …
引用总数
20182019202020212022202320241365352