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This tutorial will introduce you to docking using the AutoDock suite of programs. We will use a Graphical User Interface called AutoDockTools, or ADT, that helps a user easily set up the two molecules for docking, launches the external number crunching jobs in AutoDock, and when the dockings are completed also lets the user interactively visualize the docking results in 3D. ADT is available here: mgltools. scripps. edu/downloads. AutoDock Vina (Vina) is available here: http://vina. scripps. edu. AutoDock4 (AD4) along with other helpful information is available here: http://autodock. scripps. edu.