Updated energy budgets for neural computation in the neocortex and cerebellum C Howarth, P Gleeson, D Attwell Journal of Cerebral Blood Flow & Metabolism 32 (7), 1222-1232, 2012 | 762 | 2012 |
NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail P Gleeson, S Crook, RC Cannon, ML Hines, GO Billings, M Farinella, ... PLoS Comput Biol 6 (6), e1000815, 2010 | 389 | 2010 |
Rapid desynchronization of an electrically coupled interneuron network with sparse excitatory synaptic input K Vervaeke, A Lőrincz, P Gleeson, M Farinella, Z Nusser, RA Silver Neuron 67 (3), 435-451, 2010 | 233 | 2010 |
neuroConstruct: a tool for modeling networks of neurons in 3D space P Gleeson, V Steuber, RA Silver Neuron 54 (2), 219-235, 2007 | 221 | 2007 |
OpenWorm: an open-science approach to modelling Caenorhabditis elegans B Szigeti, P Gleeson, M Vella, S Khayrulin, A Palyanov, J Hokanson, ... Name: Frontiers in Computational Neuroscience 8, 137, 2014 | 182 | 2014 |
The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex S Ramaswamy, JD Courcol, M Abdellah, SR Adaszewski, N Antille, ... Frontiers in Neural Circuits 9, 44, 2015 | 155 | 2015 |
OpenWorm: overview and recent advances in integrative biological simulation of Caenorhabditis elegans GP Sarma, CW Lee, T Portegys, V Ghayoomie, T Jacobs, B Alicea, ... Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 134 | 2018 |
NetPyNE: a tool for data-driven multiscale modeling of brain circuits S Dura-Bernal, B Suter, P Gleeson, M Cantarelli, A Quintana, F Rodriguez, ... bioRxiv, 461137, 2018 | 129 | 2018 |
Toward standard practices for sharing computer code and programs in neuroscience SJ Eglen, B Marwick, YO Halchenko, M Hanke, S Sufi, P Gleeson, ... Nature Neuroscience 20 (6), 770-773, 2017 | 124 | 2017 |
LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2 RC Cannon, P Gleeson, S Crook, G Ganapathy, B Marin, E Piasini, ... Frontiers in Neuroinformatics 8, 2014 | 124 | 2014 |
Open Source Brain: a collaborative resource for visualizing, analyzing, simulating and developing standardized models of neurons and circuits P Gleeson, M Cantarelli, B Marin, A Quintana, M Earnshaw, E Piasini, ... bioRxiv, 229484, 2018 | 85 | 2018 |
Interoperability of neuroscience modeling software: current status and future directions RC Cannon, MO Gewaltig, P Gleeson, US Bhalla, H Cornelis, ML Hines, ... Neuroinformatics 5 (2), 127-138, 2007 | 85 | 2007 |
A Commitment to Open Source in Neuroscience P Gleeson, AP Davison, RA Silver, GA Ascoli Neuron 96 (5), 964-965, 2017 | 73 | 2017 |
Harmonizing semantic annotations for computational models in biology ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ... Briefings in bioinformatics 20 (2), 540-550, 2019 | 72 | 2019 |
MorphML: Level 1 of the NeuroML standards for neuronal morphology data and model specification S Crook, P Gleeson, F Howell, J Svitak, RA Silver Neuroinformatics 5, 96-104, 2007 | 72 | 2007 |
c302: a multiscale framework for modelling the nervous system of Caenorhabditis elegans P Gleeson, D Lung, R Grosu, R Hasani, SD Larson Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018 | 57 | 2018 |
Code generation in computational neuroscience: a review of tools and techniques I Blundell, R Brette, TA Cleland, TG Close, D Coca, AP Davison, ... Frontiers in Neuroinformatics 12, 68, 2018 | 46 | 2018 |
The SONATA data format for efficient description of large-scale network models K Dai, J Hernando, YN Billeh, SL Gratiy, J Planas, AP Davison, ... PLoS computational biology 16 (2), e1007696, 2020 | 44 | 2020 |
The SONATA Data Format for Efficient Description of Large-Scale Network Models K Dai, J Hernando, YN Billeh, SL Gratiy, J Planas, AP Davison, ... bioRxiv, 625491, 2019 | 44 | 2019 |
NineML: the network interchange for neuroscience modeling language I Raikov, R Cannon, R Clewley, H Cornelis, A Davison, E De Schutter, ... BMC Neuroscience 12 (Suppl 1), P330, 2011 | 39 | 2011 |