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David Rueda
David Rueda
Professor, Faculty of Medicine, Imperial College London
在 imperial.ac.uk 的电子邮件经过验证 - 首页
标题
引用次数
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Single-molecule transition-state analysis of RNA folding
G Bokinsky, D Rueda, VK Misra, MM Rhodes, A Gordus, HP Babcock, ...
Proceedings of the National Academy of Sciences 100 (16), 9302-9307, 2003
2682003
Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
A Autour, S CY Jeng, A D. Cawte, A Abdolahzadeh, A Galli, ...
Nature communications 9 (1), 656, 2018
2252018
Single-molecule enzymology of RNA: essential functional groups impact catalysis from a distance
D Rueda, G Bokinsky, MM Rhodes, MJ Rust, X Zhuang, NG Walter
Proceedings of the National Academy of Sciences 101 (27), 10066-10071, 2004
1872004
Rad51 paralogs remodel pre-synaptic Rad51 filaments to stimulate homologous recombination
MRG Taylor, M Špírek, KR Chaurasiya, JD Ward, R Carzaniga, X Yu, ...
Cell 162 (2), 271-286, 2015
1652015
Structure and dynamics of the yeast SWR1-nucleosome complex
O Willhoft, M Ghoneim, CL Lin, EYD Chua, M Wilkinson, Y Chaban, ...
Science 362 (6411), 2018
1552018
RNA looping by PTB: evidence using FRET and NMR spectroscopy and for a role in splicing repression
R Lamichhane, GM Daubner, J Thomas-Crusells, SD Auweter, ...
Biophysical Journal 98 (3), 72a-73a, 2010
1402010
RNA folding dynamics by single-molecule fluorescence resonance energy transfer
R Zhao, D Rueda
Methods 49 (2), 112-117, 2009
1342009
Cryo-EM structures of the eukaryotic replicative helicase bound to a translocation substrate
FA Ali, L Renault, J Gannon, HL Gahlon, A Kotecha, JC Zhou, D Rueda, ...
Nature Communications 7, 10708, 2016
1292016
Single-molecule studies of group II intron ribozymes
M Steiner, KS Karunatilaka, RKO Sigel, D Rueda
Proceedings of the National Academy of Sciences 105 (37), 13853-13858, 2008
1292008
DNA stretching induces Cas9 off-target activity
MD Newton, BJ Taylor, RPC Driessen, L Roos, N Cvetesic, S Allyjaun, ...
Nature structural & molecular biology 26 (3), 185-192, 2019
1282019
Single-molecule FRET of protein–nucleic acid and protein–protein complexes: surface passivation and immobilization
R Lamichhane, A Solem, W Black, D Rueda
Methods 52 (2), 192-200, 2010
1282010
Live cell imaging of single RNA molecules with fluorogenic Mango II arrays
AD Cawte, PJ Unrau, DS Rueda
Nature communications 11 (1), 1283, 2020
1142020
Reaction pathway of the trans-acting hepatitis delta virus ribozyme: a conformational change accompanies catalysis
MJB Pereira, DA Harris, D Rueda, NG Walter
Biochemistry 41 (3), 730-740, 2002
1102002
Single-molecule measurements of synthesis by DNA polymerase with base-pair resolution
TD Christian, LJ Romano, D Rueda
Proceedings of the National Academy of Sciences 106 (50), 21109-21114, 2009
1052009
Local conformational changes in the catalytic core of the trans-acting hepatitis delta virus ribozyme accompany catalysis
DA Harris, D Rueda, NG Walter
Biochemistry 41 (40), 12051-12061, 2002
982002
Single-molecule analysis of Mss116-mediated group II intron folding
KS Karunatilaka, A Solem, AM Pyle, D Rueda
Biophysical Journal 98 (3), 472a, 2010
972010
A rugged free energy landscape separates multiple functional RNA folds throughout denaturation
MA Ditzler, D Rueda, J Mo, K Håkansson, NG Walter
Nucleic acids research 36 (22), 7088-7099, 2008
972008
Molecular crowding accelerates ribozyme docking and catalysis
BP Paudel, D Rueda
Journal of the American Chemical Society 136 (48), 16700-16703, 2014
952014
Single-cell heterogeneity and cell-cycle-related viral gene bursts in the human leukaemia virus HTLV-1
MR Billman, D Rueda, CRM Bangham
Wellcome open research 2, 2017
932017
Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells
M Barbieri, SQ Xie, ET Triglia, AM Chiariello, S Bianco, I de Santiago, ...
Nat Struct Mol Biol. 24, 515-524, 2017
872017
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