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The Norway spruce genome sequence and conifer genome evolution JS Nystedt B, Street NR, Wetterbom A, Zuccolo A, Lin Nature, 2013 | 1554 | 2013 |
Cells of the adult human heart M Litviňuková, C Talavera-López, H Maatz, D Reichart, CL Worth, ... Nature 588 (7838), 466-472, 2020 | 1078 | 2020 |
A cellular census of human lungs identifies novel cell states in health and in asthma FA Vieira Braga, G Kar, M Berg, OA Carpaij, K Polanski, LM Simon, ... Nature medicine 25 (7), 1153-1163, 2019 | 747 | 2019 |
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ... Nature medicine 27 (3), 546-559, 2021 | 556* | 2021 |
Expression Atlas update: from tissues to single cells I Papatheodorou, P Moreno, J Manning, AMP Fuentes, N George, ... Nucleic acids research 48 (D1), D77-D83, 2020 | 495 | 2020 |
A Python library for probabilistic analysis of single-cell omics data A Gayoso, R Lopez, G Xing, P Boyeau, V Valiollah Pour Amiri, J Hong, ... Nature biotechnology 40 (2), 163-166, 2022 | 285 | 2022 |
An integrated cell atlas of the lung in health and disease L Sikkema, C Ramírez-Suástegui, DC Strobl, TE Gillett, L Zappia, ... Nature Medicine 29 (6), 1563-1577, 2023 | 224* | 2023 |
Reading and editing the Pleurodeles waltl genome reveals novel features of tetrapod regeneration A Elewa, H Wang, C Talavera-López, A Joven, G Brito, A Kumar, ... Nature communications 8 (1), 2286, 2017 | 147 | 2017 |
Chromosomal copy number variation reveals differential levels of genomic plasticity in distinct Trypanosoma cruzi strains JL Reis-Cunha, GF Rodrigues-Luiz, HO Valdivia, RP Baptista, ... BMC genomics 16, 1-15, 2015 | 92 | 2015 |
Genome of the Avirulent Human-Infective Trypanosome—Trypanosoma rangeli PH Stoco, G Wagner, C Talavera-Lopez, A Gerber, A Zaha, CE Thompson, ... PLOS Neglected Tropical Diseases 8 (9), e3176, 2014 | 92 | 2014 |
Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei O Franzén, C Talavera-López, S Ochaya, CE Butler, LA Messenger, ... BMC genomics 13, 1-19, 2012 | 81 | 2012 |
Immunology driven by large-scale single-cell sequencing T Gomes, SA Teichmann, C Talavera-López Trends in immunology 40 (11), 1011-1021, 2019 | 72 | 2019 |
Trypanosoma cruzi clone Dm28c draft genome sequence EC Grisard, SMR Teixeira, LGP de Almeida, PH Stoco, AL Gerber, ... Genome announcements 2 (1), 10.1128/genomea. 01114-13, 2014 | 67 | 2014 |
Activation of a neural stem cell transcriptional program in parenchymal astrocytes JP Magnusson, M Zamboni, G Santopolo, JE Mold, ... Elife 9, e59733, 2020 | 66 | 2020 |
Biologically informed deep learning to query gene programs in single-cell atlases AVMFJT Mohammad Lotfollahi, Sergei Rybakov, Karin Hrovatin, Soroor Hediyeh ... Nature Cell Biology, 2023 | 60* | 2023 |
Spatially resolved multiomics of human cardiac niches K Kanemaru, J Cranley, D Muraro, AMA Miranda, SY Ho, A Wilbrey-Clark, ... Nature 619 (7971), 801-810, 2023 | 54 | 2023 |
Transcriptomic profiling of microglia reveals signatures of cell activation and immune response, during experimental cerebral malaria B Capuccini, J Lin, C Talavera-López, SM Khan, J Sodenkamp, ... Scientific Reports 6 (1), 39258, 2016 | 47 | 2016 |
Repeat-Driven Generation of Antigenic Diversity in a Major Human Pathogen, Trypanosoma cruzi C Talavera-López, LA Messenger, MD Lewis, M Yeo, JL Reis-Cunha, ... Frontiers in cellular and infection microbiology 11, 614665, 2021 | 41 | 2021 |
User-friendly, scalable tools and workflows for single-cell RNA-seq analysis P Moreno, N Huang, JR Manning, S Mohammed, A Solovyev, K Polanski, ... Nature methods 18 (4), 327-328, 2021 | 37* | 2021 |