Discontinuous Hamiltonian Monte Carlo for discrete parameters and discontinuous likelihoods A Nishimura, D Dunson, J Lu Biometrika 107 (2), 365–380, 2020 | 90* | 2020 |
Alpha-1 adrenergic receptor antagonists to prevent hyperinflammation and death from lower respiratory tract infection A Koenecke, M Powell, R Xiong, Z Shen, N Fischer, S Huq, ... Elife 10, e61700, 2021 | 47* | 2021 |
Prior-Preconditioned Conjugate Gradient Method for Accelerated Gibbs Sampling in “Large n, Large p” Bayesian Sparse Regression A Nishimura, MA Suchard Journal of the American Statistical Association 118 (544), 2468-2481, 2023 | 41* | 2023 |
Gradients Do Grow on Trees: A Linear-Time O(N)-Dimensional Gradient for Statistical Phylogenetics X Ji, Z Zhang, A Holbrook, A Nishimura, G Baele, A Rambaut, P Lemey, ... Molecular biology and evolution 37 (10), 3047-3060, 2020 | 34 | 2020 |
Large-scale inference of correlation among mixed-type biological traits with phylogenetic multivariate probit models Z Zhang, A Nishimura, P Bastide, X Ji, RP Payne, P Goulder, P Lemey, ... | 26 | 2021 |
Geometrically tempered hamiltonian monte carlo A Nishimura, D Dunson arXiv preprint arXiv:1604.00872, 2016 | 25 | 2016 |
Bayesian constraint relaxation LL Duan, AL Young, A Nishimura, DB Dunson Biometrika 107 (1), 191-204, 2020 | 24 | 2020 |
Recycling intermediate steps to improve Hamiltonian Monte Carlo A Nishimura, D Dunson Bayesian Analysis, 2020 | 15 | 2020 |
Shrinkage-based random local clocks with scalable inference AA Fisher, X Ji, A Nishimura, G Baele, P Lemey, MA Suchard Molecular biology and evolution 40 (11), msad242, 2023 | 13 | 2023 |
Multinational patterns of second line antihyperglycaemic drug initiation across cardiovascular risk groups: federated pharmacoepidemiological evaluation in LEGEND-T2DM R Khera, LS Dhingra, A Aminorroaya, K Li, JJ Zhou, F Arshad, C Blacketer, ... BMJ medicine 2 (1), 2023 | 10 | 2023 |
Shrinkage with shrunken shoulders: Gibbs sampling shrinkage model posteriors with guaranteed convergence rates A Nishimura, MA Suchard Bayesian analysis 18 (2), 367, 2023 | 9* | 2023 |
International cohort study indicates no association between alpha-1 blockers and susceptibility to COVID-19 in benign prostatic hyperplasia patients A Nishimura, J Xie, K Kostka, T Duarte-Salles, S Fernández Bertolín, ... Frontiers in pharmacology 13, 945592, 2022 | 6* | 2022 |
Hamiltonian zigzag sampler got more momentum than its markovian counterpart: Equivalence of two zigzags under a momentum refreshment limit A Nishimura, Z Zhang, MA Suchard arXiv preprint arXiv:2104.07694, 2021 | 6 | 2021 |
Ten rules for conducting retrospective pharmacoepidemiological analyses: example COVID-19 study M Powell, A Koenecke, JB Byrd, A Nishimura, MF Konig, R Xiong, ... Frontiers in Pharmacology, 1799, 2021 | 6* | 2021 |
Accelerating Bayesian inference of dependency between mixed-type biological traits Z Zhang, A Nishimura, NS Trovão, JL Cherry, AJ Holbrook, X Ji, P Lemey, ... PLoS computational biology 19 (8), e1011419, 2023 | 4* | 2023 |
Variable length trajectory compressible hybrid Monte Carlo A Nishimura, D Dunson arXiv preprint arXiv:1604.00889, 2016 | 3 | 2016 |
Bayesian safety surveillance with adaptive bias correction F Bu, MJ Schuemie, A Nishimura, LH Smith, K Kostka, T Falconer, ... Statistics in Medicine 43 (2), 395-418, 2024 | 2 | 2024 |
Learning and predicting from dynamic models for COVID-19 patient monitoring Z Wang, MG Bowring, A Rosen, B Garibaldi, S Zeger, A Nishimura Statistical science: a review journal of the Institute of Mathematical …, 2022 | 2 | 2022 |
Similar Risk of Kidney Failure among Patients with Blinding Diseases Who Receive Ranibizumab, Aflibercept, and Bevacizumab: An Observational Health Data Sciences and … CX Cai, A Nishimura, MG Bowring, E Westlund, D Tran, JH Ng, P Nagy, ... Ophthalmology Retina, 2024 | 1 | 2024 |
Adjusting for both sequential testing and systematic error in safety surveillance using observational data: Empirical calibration and MaxSPRT MJ Schuemie, F Bu, A Nishimura, MA Suchard Statistics in Medicine, 2023 | 1 | 2023 |