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David Peede
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Widespread introgression across a phylogeny of 155 Drosophila genomes
A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede, ERR D’agostino, ...
Current Biology 32 (1), 111-123. e5, 2022
1642022
Highly contiguous assemblies of 101 drosophilid genomes
BY Kim, JR Wang, DE Miller, O Barmina, E Delaney, A Thompson, ...
Elife 10, e66405, 2021
1272021
Rapid and Predictable Evolution of Admixed Populations Between Two Drosophila Species Pairs
DR Matute, AA Comeault, E Earley, A Serrato-Capuchina, D Peede, ...
Genetics 214 (1), 211-230, 2020
392020
A need for standardized reporting of introgression: Insights from studies across eukaryotes
AJ Dagilis, D Peede, JM Coughlan, GI Jofre, ERR D'Agostino, ...
Evolution Letters 6 (5), 344-357, 2022
202022
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations
ME Lauterbur, MIA Cavassim, AL Gladstein, G Gower, NS Pope, ...
Elife 12, RP84874, 2023
162023
15 years of introgression studies: quantifying gene flow across Eukaryotes
AJ Dagilis, D Peede, JM Coughlan, GI Jofre, ERR D’Agostino, ...
BioRxiv, 2021.06. 15.448399, 2021
142021
Paternally Inherited P-Element Copy Number Affects the Magnitude of Hybrid Dysgenesis in Drosophila simulans and D. melanogaster
A Serrato-Capuchina, J Wang, E Earley, D Peede, K Isbell, DR Matute
Genome Biology and Evolution 12 (6), 808-826, 2020
112020
Pure species discriminate against hybrids in the Drosophila melanogaster species subgroup
A Serrato-Capuchina, TD Schwochert, S Zhang, B Roy, D Peede, ...
Evolution 75 (7), 1753-1774, 2021
102021
Highly contiguous assemblies of 101 drosophilid genomes. eLife 10
BY Kim, JR Wang, DE Miller, O Barmina, E Delaney, A Thompson, ...
eLife Sciences Publications Ltd, 2021
10*2021
P-elements strengthen reproductive isolation within the Drosophila simulans species complex
A Serrato-Capuchina, ERR D'Agostino, D Peede, B Roy, K Isbell, J Wang, ...
Evolution 75 (10), 2425-2440, 2021
72021
Population structure and introgression among recently differentiated Drosophila melanogaster populations
JM Coughlan, AJ Dagilis, A Serrato-Capuchina, H Elias, D Peede, K Isbell, ...
Biorxiv, 2021.06. 25.449842, 2021
72021
Widespread introgression across a phylogeny of 155 Drosophila genomes. bioRxiv
A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede, ER D’Agostino, ...
Jan, 2021
62021
Recent invasion of P transposable element into Drosophila yakuba
A Serrato-Capuchina, S Zhang, W Martin, D Peede, E Earley, DR Matute
bioRxiv, 453829, 2018
62018
Leveraging shared ancestral variation to detect local introgression
L Lopez Fang, D Peede, D Ortega-Del Vecchyo, EJ McTavish, ...
PLoS Genetics 20 (1), e1010155, 2024
32024
Pharmacogenetic variation in Neanderthals and Denisovans and implications for human health and response to medications
TH Wroblewski, KE Witt, S Lee, RS Malhi, D Peede, E Huerta-Sánchez, ...
Genome biology and evolution 15 (12), evad222, 2023
22023
The Utility of Ancestral and Derived Allele Sharing for Genome-Wide Inferences of Introgression
D Peede, D Ortega-Del Vecchyo, E Huerta-Sánchez
bioRxiv, 2022.12. 02.518851, 2022
22022
Patterns of Population Structure and Introgression Among Recently Differentiated Drosophila melanogaster Populations
JM Coughlan, AJ Dagilis, A Serrato-Capuchina, H Elias, D Peede, K Isbell, ...
Molecular Biology and Evolution 39 (11), msac223, 2022
22022
Toward the integration of speciation research
S Stankowski, AD Cutter, I Satokangas, BA Lerch, J Rolland, CM Smadja, ...
Evolutionary Journal of the Linnean Society 3 (1), kzae001, 2024
12024
The MUC19 gene in Denisovans, Neanderthals, and Modern Humans: An Evolutionary History of Recurrent Introgression and Natural Selection
FA Villanea, D Peede, EJ Kaufman, V Añorve-Garibay, KE Witt, ...
bioRxiv, 2023
12023
Ancient Mongolian aurochs genomes reveal sustained introgression and management in East Asia
K Brunson, KE Witt, S Monge, S Williams, D Peede, D Odsuren, ...
bioRxiv, 2023
2023
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