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Flavio Ballante
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Structure-based virtual screening for ligands of G protein–coupled receptors: what can molecular docking do for you?
F Ballante, AJ Kooistra, S Kampen, C de Graaf, J Carlsson
Pharmacological Reviews 73 (4), 1698-1736, 2021
912021
Design, synthesis and biological evaluation of new classes of thieno [3, 2-d] pyrimidinone and thieno [1, 2, 3] triazine as inhibitor of vascular endothelial growth factor …
E Perspicace, V Jouan-Hureaux, R Ragno, F Ballante, S Sartini, ...
European journal of medicinal chemistry 63, 765-781, 2013
712013
An automated strategy for binding-pose selection and docking assessment in structure-based drug design
F Ballante, GR Marshall
Journal of Chemical Information and Modeling 56 (1), 54-72, 2016
552016
2-(Alkyl/Aryl)Amino-6-Benzylpyrimidin-4(3H)-ones as Inhibitors of Wild-Type and Mutant HIV-1: Enantioselectivity Studies
D Rotili, A Samuele, D Tarantino, R Ragno, I Musmuca, F Ballante, ...
Journal of Medicinal Chemistry 55 (7), 3558-3562, 2012
452012
3-D QSAutogrid/R: An Alternative Procedure To Build 3-D QSAR Models. Methodologies and Applications.
F Ballante, R Ragno
Journal of chemical information and modeling 52 (6), 1674, 2012
442012
Design and synthesis of simplified largazole analogues as isoform-selective human lysine deacetylase inhibitors
DN Reddy, F Ballante, T Chuang, A Pirolli, B Marrocco, GR Marshall
Journal of Medicinal Chemistry 59 (4), 1613-1633, 2016
362016
Histone Deacetylase Inhibitors: Structure-Based Modeling and Isoform-Selectivity Prediction
L Silvestri, F Ballante, A Mai, GR Marshall, R Ragno
Journal of Chemical Information and Modeling, 2012
312012
Hsp90 inhibitors, part 2: combining ligand-based and structure-based approaches for virtual screening application
A Caroli, F Ballante, RB Wickersham III, F Corelli, R Ragno
Journal of chemical information and modeling 54 (3), 970-977, 2014
302014
Can molecular dynamics simulations improve the structural accuracy and virtual screening performance of GPCR models?
J Kapla, I Rodríguez-Espigares, F Ballante, J Selent, J Carlsson
PLoS Computational Biology 17 (5), e1008936, 2021
252021
Limiting Assumptions in the Design of Peptidomimetics
GR Marshall, F Ballante
Drug Development Research 78 (6), 245–267, 2017
252017
Design and synthesis of benzodiazepine analogs as isoform-selective human lysine deacetylase inhibitors
DR Reddy, F Ballante, NJ Zhou, GR Marshall
European Journal of Medicinal Chemistry 127, 531-553, 2017
232017
Docking finds GPCR ligands in dark chemical matter
F Ballante, A Rudling, A Zeifman, A Luttens, DD Vo, JJ Irwin, J Kihlberg, ...
Journal of Medicinal Chemistry 63 (2), 613-620, 2019
192019
Exploring the Role of 2-Chloro-6-fluoro Substitution in 2-Alkylthio-6-benzyl-5-alkylpyrimidin-4(3H)-ones: Effects in HIV-1-Infected Cells and in HIV-1 Reverse …
D Rotili, D Tarantino, MB Nawrozkij, AS Babushkin, G Botta, B Marrocco, ...
Journal of Medicinal Chemistry 57 (12), 5212-5225, 2014
192014
Protein-ligand docking in drug design: performance assessment and binding-pose selection
F Ballante
Rational drug design: methods and protocols, 67-88, 2018
172018
Comprehensive model of wild-type and mutant HIV-1 reverse transciptases
F Ballante, I Musmuca, GR Marshall, R Ragno
Journal of Computer-Aided Molecular Design, 1-13, 2012
172012
Structural insights of SmKDAC8 inhibitors: Targeting Schistosoma epigenetics through a combined structure-based 3D QSAR, in vitro and synthesis strategy
F Ballante, DR Reddy, NJ Zhou, GR Marshall
Bioorganic & Medicinal Chemistry 25 (7), 2105-2132, 2017
162017
Hsp90 inhibitors, part 1: definition of 3-D QSAutogrid/R models as a tool for virtual screening
F Ballante, A Caroli, RB Wickersham III, R Ragno
Journal of Chemical Information and Modeling 54 (3), 956-969, 2014
162014
Identification of histone deacetylase inhibitors with (arylidene) aminoxy scaffold active in uveal melanoma cell lines
S Nencetti, D Cuffaro, E Nuti, L Ciccone, A Rossello, M Fabbi, F Ballante, ...
Journal of Enzyme Inhibition and Medicinal Chemistry 36 (1), 34-47, 2021
152021
Protein-Ligand Interactions and Drug Design
F Ballante
Methods Molecular Biology 1 (2266), XV, 327, 2021
132021
Pharmacophore assessment through 3-D QSAR: evaluation of the predictive ability on new derivatives by the application on a series of antitubercular agents
L Friggeri, F Ballante, R Ragno, I Musmuca, D De Vita, F Manetti, M Biava, ...
Journal of chemical information and modeling 53 (6), 1463-1474, 2013
122013
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