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Joshua Welch
Joshua Welch
Assistant Professor, University of Michigan
在 umich.edu 的电子邮件经过验证 - 首页
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引用次数
引用次数
年份
Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution
SG Rodriques, RR Stickels, A Goeva, CA Martin, E Murray, ...
Science 363 (6434), 1463-1467, 2019
12242019
Single-cell multi-omic integration compares and contrasts features of brain cell identity
JD Welch, V Kozareva, A Ferreira, C Vanderburg, C Martin, EZ Macosko
Cell 177 (7), 1873-1887. e17, 2019
6932019
Single-cell transcriptomics reconstructs fate conversion from fibroblast to cardiomyocyte
Z Liu, L Wang, JD Welch, H Ma, Y Zhou, HR Vaseghi, S Yu, JB Wall, ...
Nature 551 (7678), 100-104, 2017
1822017
SLICER: inferring branched, nonlinear cellular trajectories from single cell RNA-seq data
JD Welch, AJ Hartemink, JF Prins
Genome biology 17 (1), 1-15, 2016
1712016
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
1512021
A Wnt-mediated transformation of the bone marrow stromal cell identity orchestrates skeletal regeneration
Y Matsushita, M Nagata, KM Kozloff, JD Welch, K Mizuhashi, ...
Nature Communications 11 (1), 332, 2020
1472020
MATCHER: manifold alignment reveals correspondence between single cell transcriptome and epigenome dynamics
JD Welch, AJ Hartemink, JF Prins
Genome biology 18 (1), 1-19, 2017
1342017
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
1102021
Single-cell transcriptomic analyses of cell fate transitions during human cardiac reprogramming
Y Zhou, Z Liu, JD Welch, X Gao, L Wang, T Garbutt, B Keepers, H Ma, ...
Cell Stem Cell 25 (1), 149-164. e9, 2019
802019
Jointly defining cell types from multiple single-cell datasets using LIGER
J Liu, C Gao, J Sodicoff, V Kozareva, EZ Macosko, JD Welch
Nature protocols 15 (11), 3632-3662, 2020
752020
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ...
Biorxiv, 2020.02. 29.970558, 2020
592020
Deep sequencing shows multiple oligouridylations are required for 3′ to 5′ degradation of histone mRNAs on polyribosomes
MK Slevin, S Meaux, JD Welch, R Bigler, PLM de Marval, W Su, ...
Molecular cell 53 (6), 1020-1030, 2014
562014
A subset of replication-dependent histone mRNAs are expressed as polyadenylated RNAs in terminally differentiated tissues
SM Lyons, CH Cunningham, JD Welch, B Groh, AY Guo, B Wei, ...
Nucleic acids research 44 (19), 9190-9205, 2016
552016
Robust detection of alternative splicing in a population of single cells
JD Welch, Y Hu, JF Prins
Nucleic acids research 44 (8), e73-e73, 2016
522016
TUT7 catalyzes the uridylation of the 3′ end for rapid degradation of histone mRNA
PE Lackey, JD Welch, WF Marzluff
Rna 22 (11), 1673-1688, 2016
492016
Pseudogenes transcribed in breast invasive carcinoma show subtype-specific expression and ceRNA potential
JD Welch, J Baran-Gale, CM Perou, P Sethupathy, JF Prins
BMC genomics 16 (1), 1-16, 2015
452015
Iterative single-cell multi-omic integration using online learning
C Gao, J Liu, AR Kriebel, S Preissl, C Luo, R Castanon, J Sandoval, ...
Nature biotechnology 39 (8), 1000-1007, 2021
422021
The word landscape of the non-coding segments of the Arabidopsis thaliana genome
J Lichtenberg, A Yilmaz, JD Welch, K Kurz, X Liang, F Drews, K Ecker, ...
BMC genomics 10, 1-31, 2009
402009
Miliani de Marval PL, Su W, Rhoads RE, Prins JF, Marzluff WF. 2014. Deep sequencing shows multiple oligouridylations are required for 3′ to 5′ degradation of histone mRNAs on …
MK Slevin, S Meaux, JD Welch, R Bigler
Mol Cell 53, 1020-1030, 0
36
G-CSF secreted by mutant IDH1 glioma stem cells abolishes myeloid cell immunosuppression and enhances the efficacy of immunotherapy
MS Alghamri, BL McClellan, RP Avvari, R Thalla, S Carney, CS Hartlage, ...
Science Advances 7 (40), eabh3243, 2021
342021
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