关注
Sid Chaudhury
Sid Chaudhury
Armed Forces Research Institute of Medical Sciences (AFRIMS), Bangkok, Thailand
在 health.mil 的电子邮件经过验证
标题
引用次数
引用次数
年份
PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta
S Chaudhury, S Lyskov, JJ Gray
Bioinformatics 26 (5), 689-691, 2010
7402010
Benchmarking and analysis of protein docking performance in Rosetta v3. 2
S Chaudhury, M Berrondo, BD Weitzner, P Muthu, H Bergman, JJ Gray
PLOS ONE 6 (8), e22477, 2011
3332011
Toward high‐resolution homology modeling of antibody Fv regions and application to antibody–antigen docking
A Sivasubramanian, A Sircar, S Chaudhury, JJ Gray
Proteins 74 (2), 497-514, 2009
2302009
Conformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles
S Chaudhury, JJ Gray
Journal of Molecular Biology 381 (4), 1068, 2008
1962008
Exploring polypharmacology using a ROCS-based target fishing approach
MDM AbdulHameed, S Chaudhury, N Singh, H Sun, A Wallqvist, GJ Tawa
Journal of Chemical Information and Modeling 52 (2), 492-505, 2012
932012
The biological function of antibodies induced by the RTS, S/AS01 malaria vaccine candidate is determined by their fine specificity
S Chaudhury, CF Ockenhouse, JA Regules, S Dutta, A Wallqvist, ...
Malaria Journal 15, 1-12, 2016
852016
Delayed fractional dose regimen of the RTS, S/AS01 malaria vaccine candidate enhances an IgG4 response that inhibits serum opsonophagocytosis
S Chaudhury, JA Regules, CA Darko, S Dutta, A Wallqvist, NC Waters, ...
Scientific Reports 7 (1), 7998, 2017
722017
Simulation of B cell affinity maturation explains enhanced antibody cross-reactivity induced by the polyvalent malaria vaccine AMA1
S Chaudhury, J Reifman, A Wallqvist
Journal of Immunology 193 (5), 2073-2086, 2014
632014
A generalized approach to sampling backbone conformations with RosettaDock for CAPRI rounds 13–19
A Sircar, S Chaudhury, KP Kilambi, M Berrondo, JJ Gray
Proteins 78 (15), 3115-3123, 2010
632010
Incorporating biochemical information and backbone flexibility in RosettaDock for CAPRI rounds 6–12
S Chaudhury, A Sircar, A Sivasubramanian, M Berrondo, JJ Gray
Proteins 69 (4), 793-800, 2007
572007
Computational and Experimental Validation of B and T-Cell Epitopes of the In Vivo Immune Response to a Novel Malarial Antigen
ES Bergmann-Leitner, S Chaudhury, NJ Steers, M Sabato, V Delvecchio, ...
PLOS ONE 8 (8), e71610, 2013
552013
A delayed fractionated dose RTS, S AS01 vaccine regimen mediates protection via improved T follicular helper and B cell responses
S Pallikkuth, S Chaudhury, P Lu, L Pan, E Jongert, U Wille-Reece, ...
Elife 9, e51889, 2020
512020
QSAR Classification Model for Antibacterial Compounds and Its Use in Virtual Screening
N Singh, S Chaudhury, R Liu, MDM AbdulHameed, G Tawa, A Wallqvist
Journal of Chemical Information and Modeling 52 (10), 2559-2569, 2012
472012
Identification of structural mechanisms of HIV-1 protease specificity using computational peptide docking: implications for drug resistance
S Chaudhury, JJ Gray
Structure 17 (12), 1636-1648, 2009
452009
Comparison of ELISA with electro-chemiluminescence technology for the qualitative and quantitative assessment of serological responses to vaccination
JS Bolton, S Chaudhury, S Dutta, S Gregory, E Locke, T Pierson, ...
Malaria Journal 19 (1), 1-13, 2020
372020
Tegaserod mimics the neurostimulatory glycan polysialic acid and promotes nervous system repair
J Bushman, B Mishra, M Ezra, S Gul, C Schulze, S Chaudhury, D Ripoll, ...
Neuropharmacology 79, 456-466, 2014
352014
Synthesis and evaluation of Strychnos alkaloids as MDR reversal agents for cancer cell eradication
S Munagala, G Sirasani, P Kokkonda, M Phadke, N Krynetskaia, P Lu, ...
Bioorganic & Medicinal Chemistry 22 (3), 1148-1155, 2014
352014
Breadth of humoral immune responses to the C-terminus of the circumsporozoite protein is associated with protective efficacy induced by the RTS, S malaria vaccine
S Chaudhury, RS MacGill, AM Early, JS Bolton, CR King, E Locke, ...
Vaccine, 2021
332021
BRILIA: integrated tool for high-throughput annotation and lineage tree assembly of B-cell repertoires
DW Lee, IV Khavrutskii, A Wallqvist, S Bavari, CL Cooper, S Chaudhury
Frontiers in Immunology 7, 681, 2017
322017
Dengue virus antibody database: Systematically linking serotype-specificity with epitope mapping in dengue virus
S Chaudhury, GD Gromowski, DR Ripoll, IV Khavrutskii, V Desai, ...
PLoS Neglected Tropical Diseases 11 (2), e0005395, 2017
282017
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