Long noncoding RNA expression profiling in cancer: challenges and opportunities L Lorenzi, F Avila Cobos, A Decock, C Everaert, H Helsmoortel, S Lefever, ... Genes, Chromosomes and Cancer 58 (4), 191-199, 2019 | 128 | 2019 |
Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers A Decock, M Ongenaert, J Hoebeeck, K De Preter, G Van Peer, ... Genome biology 13, 1-15, 2012 | 108 | 2012 |
Neuroblastoma epigenetics: from candidate gene approaches to genome-wide screenings A Decock, M Ongenaert, J Vandesompele, F Speleman Epigenetics 6 (8), 962-970, 2011 | 70 | 2011 |
Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles C Everaert, H Helsmoortel, A Decock, E Hulstaert, R Van Paemel, ... Scientific reports 9 (1), 17574, 2019 | 59 | 2019 |
MYCN and HDAC5 transcriptionally repress CD9 to trigger invasion and metastasis in neuroblastoma J Fabian, D Opitz, K Althoff, M Lodrini, B Hero, R Volland, A Beckers, ... Oncotarget 7 (41), 66344, 2016 | 38 | 2016 |
Methyl-CpG-binding domain sequencing reveals a prognostic methylation signature in neuroblastoma A Decock, M Ongenaert, R Cannoodt, K Verniers, B De Wilde, G Laureys, ... Oncotarget 7 (2), 1960, 2016 | 32 | 2016 |
Circulating microRNA biomarkers for metastatic disease in neuroblastoma patients F Zeka, A Decock, A Van Goethem, K Vanderheyden, F Demuynck, ... JCI insight 3 (23), 2018 | 30 | 2018 |
Stage 4S neuroblastoma tumors show a characteristic DNA methylation portrait A Decock, M Ongenaert, B De Wilde, B Brichard, R Noguera, F Speleman, ... Epigenetics 11 (10), 761-771, 2016 | 29 | 2016 |
Benchmarking blood collection tubes and processing intervals for extracellular vesicle performance metrics B Dhondt, C Pinheiro, E Geeurickx, J Tulkens, G Vergauwen, ... Journal of Extracellular Vesicles 12 (5), e12315, 2023 | 27 | 2023 |
DNA methylation profiling of primary neuroblastoma tumors using methyl-CpG-binding domain sequencing A Decock, M Ongenaert, W Van Criekinge, F Speleman, J Vandesompele Scientific data 3 (1), 1-11, 2016 | 15 | 2016 |
Messenger RNA capture sequencing of extracellular RNA from human biofluids using a comprehensive set of spike-in controls E Hulstaert, A Decock, A Morlion, C Everaert, K Verniers, J Nuytens, ... STAR protocols 2 (2), 100475, 2021 | 9 | 2021 |
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study ExRNAQC Consortium, J Anckaert, F Avila Cobos, A Decock, ... BioRxiv, 2021.05. 11.442610, 2021 | 8 | 2021 |
Whole transcriptome profiling of liquid biopsies from tumour xenografted mouse models enables specific monitoring of tumour-derived extracellular RNA V Vermeirssen, J Deleu, A Morlion, C Everaert, J De Wilde, J Anckaert, ... NAR cancer 4 (4), zcac037, 2022 | 6 | 2022 |
mRNA capture sequencing and RT-qPCR for the detection of pathognomonic, novel, and secondary fusion transcripts in FFPE tissue: a sarcoma showcase A Decock, D Creytens, S Lefever, J Van der Meulen, J Anckaert, ... International Journal of Molecular Sciences 23 (19), 11007, 2022 | 4 | 2022 |
The extracellular RNA quality control (exRNAQC) study: testing and controlling pre-analytical variables of RNA sequencing on liquid biopsies A Decock, O De Wever, B Dhondt, T D'huyvetter, H Helsmoortel, ... LKI Symposium 2017: Liquid biopsies & cancer, 2017 | 2 | 2017 |
Subpar reporting of pre‐analytical variables in RNA‐focused blood plasma studies C Van Der Schueren, P Decruyenaere, F Avila Cobos, J Bult, J Deleu, ... Molecular Oncology, 2024 | 1 | 2024 |
Digital PCR-based evaluation of nucleic acid extraction kit performance for the co-purification of cell-free DNA and RNA J Deleu, K Schoofs, A Decock, K Verniers, S Roelandt, A Denolf, J Verreth, ... Human Genomics 16 (1), 73, 2022 | 1 | 2022 |
Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study A Decock, O De Wever, C Everaert, H Helsmoortel, A Hendrix, ... VIB Tools and Technologies Conference 2021: Revolutionizing Next-Generation …, 2021 | 1 | 2021 |
Dramatic impact of blood collection tube and RNA purification method on extracellular RNA transcriptomes J Anckaert, F Avila Cobos, A Decock, P Decruyenaere, J Deleu, ... 6th Advances in Circulating Tumor Cells, 2023 | | 2023 |
Reporting of pre-analytical variables in RNA-focused blood plasma studies: a prerequisite for quality assessment and replication C Van Der Schueren, P Decruyenaere, F Avila Cobos, J Bult, J Deleu, ... 6th Advances in Circulating Tumor Cells, 2023 | | 2023 |