Segmentation and shape tracking of whole fluorescent cells based on the Chan–Vese model M Maška, O Daněk, S Garasa, A Rouzaut, A Munoz-Barrutia, ... IEEE transactions on medical imaging 32 (6), 995-1006, 2013 | 138 | 2013 |
Segmentation of touching cell nuclei using a two-stage graph cut model O Daněk, P Matula, C Ortiz-de-Solórzano, A Muñoz-Barrutia, M Maška, ... Image Analysis: 16th Scandinavian Conference, SCIA 2009, Oslo, Norway, June …, 2009 | 62 | 2009 |
Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin L Stixová, E Bártová, P Matula, O Daněk, S Legartová, S Kozubek Epigenetics & chromatin 4, 1-17, 2011 | 32 | 2011 |
Acquiarium: free software for the acquisition and analysis of 3D images of cells in fluorescence microscopy P Matula, M Maska, O Danek, P Matula, M Kozubek 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2009 | 25 | 2009 |
Smooth Chan–Vese segmentation via graph cuts O Daněk, P Matula, M Maška, M Kozubek Pattern Recognition Letters 33 (10), 1405-1410, 2012 | 24 | 2012 |
The distribution of Dermacentor reticulatus in the Czech Republic re-assessed: citizen science approach to understanding the current distribution of the Babesia canis vector O Daněk, K Hrazdilová, D Kozderková, D Jirků, D Modrý Parasites & Vectors 15 (1), 132, 2022 | 23 | 2022 |
A new report of adult Hyalomma marginatum and Hyalomma rufipes in the Czech Republic PM Lesiczka, O Daněk, D Modrý, K Hrazdilová, J Votýpka, L Zurek Ticks and Tick-borne Diseases 13 (2), 101894, 2022 | 18 | 2022 |
Red fox (Vulpes vulpes) play an important role in the propagation of tick-borne pathogens PM Lesiczka, N Rudenko, M Golovchenko, J Juránková, O Daněk, ... Ticks and tick-borne diseases 14 (1), 102076, 2023 | 12 | 2023 |
A fast level set-like algorithm for region-based active contours M Maška, P Matula, O Daněk, M Kozubek Advances in Visual Computing: 6th International Symposium, ISVC 2010, Las …, 2010 | 12 | 2010 |
Graph Cut Based Image Segmentation in Fluorescence Microscopy O Daněk Masarykova univerzita, 2012 | 10 | 2012 |
An improved riemannian metric approximation for graph cuts O Daněk, P Matula Discrete Geometry for Computer Imagery: 16th IAPR International Conference …, 2011 | 9 | 2011 |
The role of chromatin condensation during granulopoiesis in the regulation of gene cluster expression S Stejskal, I Koutna, P Matula, Z Rucka, O Danek, M Maska, M Kozubek Epigenetics 5 (8), 758-766, 2010 | 9 | 2010 |
A two-phase segmentation of cell nuclei using fast level set-like algorithms M Maška, O Daněk, C Ortiz-de-Solórzano, A Muñoz-Barrutia, M Kozubek, ... Image Analysis: 16th Scandinavian Conference, SCIA 2009, Oslo, Norway, June …, 2009 | 9 | 2009 |
Graph cuts and approximation of the euclidean metric on anisotropic grids O Daněk, P Matula VISAPP International Conference on Computer Vision Theory and Applications …, 2010 | 8 | 2010 |
On euclidean metric approximation via graph cuts O Daněk, P Matula Computer Vision, Imaging and Computer Graphics. Theory and Applications …, 2011 | 6 | 2011 |
Baylisascaris transfuga (Ascaridoidea, Nematoda) from European brown bear (Ursus arctos) causing larva migrans in laboratory mice with clinical manifestation J Juránková, L Hofmannová, L Frgelecová, O Daněk, D Modrý Parasitology Research 121 (2), 645-651, 2022 | 5 | 2022 |
A simple topology preserving max-flow algorithm for graph cut based image segmentation O Daněk, M Maška Sixth Doctoral Workshop on Mathematical and Engineering Methods in Computer …, 2011 | 5 | 2011 |
Genetic analysis challenges the presence of Ixodes inopinatus in Central Europe: development of a multiplex PCR to distinguish I. inopinatus from I. ricinus K Hrazdilova, O Danek, A Hrbatova, B Cervena, E Noskova, P Adamik, ... Parasites & Vectors 16 (1), 354, 2023 | 3 | 2023 |
Role of invasive carnivores (Procyon lotor and Nyctereutes procyonoides) in epidemiology of vector-borne pathogens: molecular survey from the Czech Republic O Daněk, PM Lesiczka, I Hammerbauerova, K Volfova, J Juránková, ... Parasites & Vectors 16 (1), 219, 2023 | 3 | 2023 |
Identification of tapeworm species in genetically characterised grey wolves recolonising central Europe J Juránková, P Hulva, BČ Bolfíková, K Hrazdilová, L Frgelecová, O Daněk, ... Acta Parasitologica, 1-5, 2021 | 3 | 2021 |