Detecting differential expression in RNA-sequence data using quasi-likelihood with shrunken dispersion estimates SP Lund, D Nettleton, DJ McCarthy, GK Smyth Statistical applications in genetics and molecular biology 11 (5), 2012 | 346 | 2012 |
Transcriptional responses of Pseudomonas syringae to growth in epiphytic versus apoplastic leaf sites X Yu, SP Lund, RA Scott, JW Greenwald, AH Records, D Nettleton, ... Proceedings of the National Academy of Sciences 110 (5), E425-E434, 2013 | 230 | 2013 |
Best practices for evaluating single nucleotide variant calling methods for microbial genomics ND Olson, SP Lund, RE Colman, JT Foster, JW Sahl, JM Schupp, P Keim, ... Frontiers in genetics 6, 235, 2015 | 217 | 2015 |
Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents A Paschold, Y Jia, C Marcon, S Lund, NB Larson, CT Yeh, S Ossowski, ... Genome research 22 (12), 2445-2454, 2012 | 169 | 2012 |
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures SA Munro, SP Lund, PS Pine, H Binder, DA Clevert, A Conesa, J Dopazo, ... Nature communications 5 (1), 5125, 2014 | 127 | 2014 |
Likelihood ratio as weight of forensic evidence: a closer look SP Lund, H Iyer Journal of Research of the National Institute of Standards and Technology 122, 1, 2017 | 90 | 2017 |
Transcriptional analysis of the global regulatory networks active in Pseudomonas syringae during leaf colonization X Yu, SP Lund, JW Greenwald, AH Records, RA Scott, D Nettleton, ... MBio 5 (5), 10.1128/mbio. 01683-14, 2014 | 65 | 2014 |
AB ayesian Integrative Genomic Model for Pathway Analysis of Complex Traits BL Fridley, S Lund, GD Jenkins, L Wang Genetic epidemiology 36 (4), 352-359, 2012 | 59 | 2012 |
Counting Caenorhabditis elegans: Protocol Optimization and Applications for Population Growth and Toxicity Studies in Liquid Medium LD Scanlan, SP Lund, SH Coskun, SK Hanna, ME Johnson, CM Sims, ... Scientific Reports 8 (1), 904, 2018 | 47 | 2018 |
Interlaboratory study to validate a STR profiling method for intraspecies identification of mouse cell lines JL Almeida, A Dakic, K Kindig, M Kone, DLD Letham, S Langdon, R Peat, ... PLoS One 14 (6), e0218412, 2019 | 41 | 2019 |
Development of NIST standard reference material 2373: Genomic DNA standards for HER2 measurements HJ He, JL Almeida, SP Lund, CR Steffen, S Choquette, KD Cole Biomolecular Detection and Quantification 8, 1-8, 2016 | 28 | 2016 |
Evaluating the quality of a cell counting measurement process via a dilution series experimental design S Sarkar, SP Lund, R Vyzasatya, P Vanguri, JT Elliott, AL Plant, ... Cytotherapy 19 (12), 1509-1521, 2017 | 27 | 2017 |
Energy-dependent Ps-He momentum-transfer cross section at low energies JJ Engbrecht, MJ Erickson, CP Johnson, AJ Kolan, AE Legard, SP Lund, ... Physical Review A—Atomic, Molecular, and Optical Physics 77 (1), 012711, 2008 | 26 | 2008 |
An international comparability study on quantification of mRNA gene expression ratios: CCQM-P103. 1 AS Devonshire, R Sanders, AS Whale, GJ Nixon, S Cowen, SLR Ellison, ... Biomolecular detection and quantification 8, 15-28, 2016 | 24 | 2016 |
Certified DNA reference materials to compare HER2 gene amplification measurements using next-generation sequencing methods CJ Lih, H Si, B Das, RD Harrington, KN Harper, DJ Sims, PM McGregor, ... The Journal of Molecular Diagnostics 18 (5), 753-761, 2016 | 21 | 2016 |
Validation of ctDNA quality control materials through a precompetitive collaboration of the Foundation for the National Institutes of Health PM Williams, T Forbes, S P. Lund, KD Cole, HJ He, C Karlovich, ... JCO Precision Oncology 5, 910-920, 2021 | 18 | 2021 |
Development and interlaboratory evaluation of a NIST Reference Material RM 8366 for EGFR and MET gene copy number measurements HJ He, B Das, MH Cleveland, L Chen, CE Camalier, LC Liu, KL Norman, ... Clinical Chemistry and Laboratory Medicine (CCLM) 57 (8), 1142-1152, 2019 | 14 | 2019 |
Evaluation of two mitochondrial DNA biomarkers for prostate cancer detection S Maragh, RW Veltri, SP Lund, L Mangold, S Isharwal, CS Christudass, ... Cancer Biomarkers 15 (6), 763-773, 2015 | 11 | 2015 |
Background intensity correction for terabyte‐sized time‐lapse images J Chalfoun, M Majurski, K Bhadriraju, S Lund, P Bajcsy, M Brady Journal of Microscopy 257 (3), 226-237, 2015 | 10 | 2015 |
Evaluation of microbial qPCR workflows using engineered Saccharomyces cerevisiae SM Da Silva, LK Vang, ND Olson, SP Lund, AS Downey, Z Kelman, ... Biomolecular detection and quantification 7, 27-33, 2016 | 8 | 2016 |