CoordinateCleaner: Standardized cleaning of occurrence records from biological collection databases A Zizka, D Silvestro, T Andermann, J Azevedo, C Duarte Ritter, D Edler, ... Methods in Ecology and Evolution 10 (5), 744-751, 2019 | 660 | 2019 |
The past and future human impact on mammalian diversity T Andermann, S Faurby, ST Turvey, A Antonelli, D Silvestro Science advances 6 (36), eabb2313, 2020 | 154 | 2020 |
Conceptual and empirical advances in Neotropical biodiversity research A Antonelli, M Ariza, J Albert, T Andermann, J Azevedo, C Bacon, ... PeerJ 6, e5644, 2018 | 154 | 2018 |
Allele phasing greatly improves the phylogenetic utility of ultraconserved elements T Andermann, AM Fernandes, U Olsson, M Töpel, B Pfeil, B Oxelman, ... Systematic biology 68 (1), 32-46, 2019 | 107 | 2019 |
A guide to carrying out a phylogenomic target sequence capture project T Andermann, MF Torres Jiménez, P Matos-Maraví, R Batista, ... Frontiers in genetics 10, 1407, 2020 | 94 | 2020 |
SECAPR—a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments T Andermann, Á Cano, A Zizka, C Bacon, A Antonelli PeerJ 6, e5175, 2018 | 61 | 2018 |
Madagascar’s extraordinary biodiversity: Threats and opportunities H Ralimanana, AL Perrigo, RJ Smith, JS Borrell, S Faurby, MT Rajaonah, ... Science 378 (6623), eadf1466, 2022 | 53 | 2022 |
An introduction to plant phylogenomics with a focus on palms CF Barrett, CD Bacon, A Antonelli, Á Cano, T Hofmann Botanical Journal of the Linnean Society 182 (2), 234-255, 2016 | 53 | 2016 |
Estimating alpha, beta, and gamma diversity through deep learning T Andermann, A Antonelli, R Barrett, D Silvestro Frontiers in Plant Science, 2022 | 52 | 2022 |
Madagascar’s extraordinary biodiversity: Evolution, distribution, and use A Antonelli, RJ Smith, AL Perrigo, A Crottini, J Hackel, W Testo, H Farooq, ... Science 378 (6623), eabf0869, 2022 | 48 | 2022 |
Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard–a report from a May 23-24, 2016 workshop (Gothenburg, Sweden) K Abarenkov, RI Adams, I Laszlo, A Agan, E Ambrosio, A Antonelli, ... MycoKeys 16, 1-15, 2016 | 40 | 2016 |
Estimating age-dependent extinction: contrasting evidence from fossils and phylogenies O Hagen, T Andermann, TB Quental, A Antonelli, D Silvestro Systematic biology 67 (3), 458-474, 2018 | 38 | 2018 |
Prior choice affects ability of Bayesian neural networks to identify unknowns D Silvestro, T Andermann arXiv preprint arXiv:2005.04987, 2020 | 28 | 2020 |
iucn_sim: a new program to simulate future extinctions based on IUCN threat status T Andermann, S Faurby, R Cooke, D Silvestro, A Antonelli Ecography 44 (2), 162-176, 2021 | 25 | 2021 |
Phylogenomics and biogeography of the world's thrushes (Aves, Turdus): new evidence for a more parsimonious evolutionary history R Batista, U Olsson, T Andermann, A Aleixo, CC Ribas, A Antonelli Proceedings of the Royal Society B 287 (1919), 20192400, 2020 | 24 | 2020 |
IUCNN – Deep learning approaches to approximate species' extinction risk A Zizka, T Andermann, D Silvestro Diversity and Distributions 28 (2), 227-241, 2022 | 22 | 2022 |
Phylogenomics of the tropical plant family Ochnaceae using targeted enrichment of nuclear genes and 250+ taxa JV Schneider, T Jungcurt, D Cardoso, AM Amorim, M Töpel, T Andermann, ... Taxon 70 (1), 48-71, 2021 | 20 | 2021 |
Global estimation and mapping of the conservation status of tree species using artificial intelligence SV Silva, T Andermann, A Zizka, G Kozlowski, D Silvestro Frontiers in Plant Science 13, 839792, 2022 | 19 | 2022 |
Undiscovered bird extinctions obscure the true magnitude of human-driven extinction waves R Cooke, F Sayol, T Andermann, TM Blackburn, MJ Steinbauer, ... Nature Communications 14 (1), 8116, 2023 | 15 | 2023 |
Target sequence capture of Barnadesioideae (Compositae) demonstrates the utility of low coverage loci in phylogenomic analyses P de Lima Ferreira, R Batista, T Andermann, M Groppo, CD Bacon, ... Molecular Phylogenetics and Evolution 169, 107432, 2022 | 12 | 2022 |