Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ... Applied and environmental microbiology 75 (23), 7537-7541, 2009 | 20774 | 2009 |
Towards a unified paradigm for sequence‐based identification of fungi U Kõljalg, RH Nilsson, K Abarenkov, L Tedersoo, AFS Taylor, M Bahram, ... Molecular ecology 22 (21), 5271-5277, 2013 | 3404 | 2013 |
Distinct soil microbial diversity under long-term organic and conventional farming M Hartmann, B Frey, J Mayer, P Mäder, F Widmer The ISME journal 9 (5), 1177-1194, 2015 | 1277 | 2015 |
Improved software detection and extraction of ITS1 and ITS 2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data J Bengtsson‐Palme, M Ryberg, M Hartmann, S Branco, Z Wang, A Godhe, ... Methods in ecology and evolution 4 (10), 914-919, 2013 | 1236 | 2013 |
Early life antibiotic‐driven changes in microbiota enhance susceptibility to allergic asthma SL Russell, MJ Gold, M Hartmann, BP Willing, L Thorson, M Wlodarska, ... EMBO reports 13 (5), 440-447, 2012 | 967 | 2012 |
Microbes as engines of ecosystem function: when does community structure enhance predictions of ecosystem processes? EB Graham, JE Knelman, A Schindlbacher, S Siciliano, M Breulmann, ... Frontiers in microbiology 7, 214, 2016 | 610 | 2016 |
metaxa2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data J Bengtsson‐Palme, M Hartmann, KM Eriksson, C Pal, K Thorell, ... Molecular ecology resources 15 (6), 1403-1414, 2015 | 466 | 2015 |
Networking in the plant microbiome MGA Van Der Heijden, M Hartmann PLoS biology 14 (2), e1002378, 2016 | 439 | 2016 |
Resistance and resilience of the forest soil microbiome to logging-associated compaction M Hartmann, PA Niklaus, S Zimmermann, S Schmutz, J Kremer, ... The ISME journal 8 (1), 226-244, 2014 | 362 | 2014 |
Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests M Hartmann, CG Howes, D VanInsberghe, H Yu, D Bachar, R Christen, ... The ISME journal 6 (12), 2199-2218, 2012 | 347 | 2012 |
A comprehensive, automatically updated fungal ITS sequence dataset for reference-based chimera control in environmental sequencing efforts RH Nilsson, L Tedersoo, M Ryberg, E Kristiansson, M Hartmann, ... Microbes and environments 30 (2), 145-150, 2015 | 266 | 2015 |
Long-term warming alters the composition of Arctic soil microbial communities JR Deslippe, M Hartmann, SW Simard, WW Mohn FEMS microbiology ecology 82 (2), 303-315, 2012 | 265 | 2012 |
Microbial diversity in European alpine permafrost and active layers B Frey, T Rime, M Phillips, B Stierli, I Hajdas, F Widmer, M Hartmann FEMS microbiology ecology 92 (3), fiw018, 2016 | 264 | 2016 |
Soil structure and microbiome functions in agroecosystems M Hartmann, J Six Nature Reviews Earth & Environment 4 (1), 4-18, 2023 | 259 | 2023 |
Community structure analyses are more sensitive to differences in soil bacterial communities than anonymous diversity indices M Hartmann, F Widmer Applied and Environmental Microbiology 72 (12), 7804-7812, 2006 | 241 | 2006 |
Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences RH Nilsson, L Tedersoo, K Abarenkov, M Ryberg, E Kristiansson, ... MycoKeys 4, 37-63, 2012 | 227 | 2012 |
An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology RH Nilsson, V Veldre, M Hartmann, M Unterseher, A Amend, J Bergsten, ... fungal ecology 3 (4), 284-287, 2010 | 222 | 2010 |
Long‐term experimental manipulation of climate alters the ectomycorrhizal community of Betula nana in Arctic tundra JR Deslippe, M Hartmann, WW Mohn, SW Simard Global change biology 17 (4), 1625-1636, 2011 | 215 | 2011 |
Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands M Hartmann, S Lee, SJ Hallam, WW Mohn Environmental Microbiology 11 (12), 3045-3062, 2009 | 209 | 2009 |
Improving ITS sequence data for identification of plant pathogenic fungi RH Nilsson, KD Hyde, J Pawłowska, M Ryberg, L Tedersoo, AB Aas, ... Fungal Diversity 67, 11-19, 2014 | 180 | 2014 |