Fiji: an open-source platform for biological-image analysis J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ... Nature Methods 9 (7), 676-682, 2012 | 55278 | 2012 |
Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification I Arganda-Carreras, V Kaynig, C Rueden, KW Eliceiri, J Schindelin, ... Bioinformatics, 2017 | 1987 | 2017 |
TrakEM2 Software for Neural Circuit Reconstruction A Cardona, S Saalfeld, J Schindelin, I Arganda-Carreras, S Preibisch, ... PLoS ONE 7 (6), e38011, 2012 | 963 | 2012 |
A high-level 3D visualization API for Java and ImageJ B Schmid, J Schindelin, A Cardona, M Longair, M Heisenberg BMC bioinformatics 11 (1), 274, 2010 | 588 | 2010 |
The complete connectome of a learning and memory centre in an insect brain. K Eichler, F Li, A Litwin-Kumar, Y Park, I Andrade, CM Schneider-Mizell, ... Nature 548 (7666), 175, 2017 | 482 | 2017 |
A multilevel multimodal circuit enhances action selection in Drosophila T Ohyama, CM Schneider-Mizell, RD Fetter, JV Aleman, R Franconville, ... Nature 520 (7549), 633-639, 2015 | 448 | 2015 |
An integrated micro-and macroarchitectural analysis of the Drosophila brain by computer-assisted serial section electron microscopy A Cardona, S Saalfeld, S Preibisch, B Schmid, A Cheng, J Pulokas, ... PLoS biology 8 (10), e1000502, 2010 | 429 | 2010 |
CATMAID: collaborative annotation toolkit for massive amounts of image data S Saalfeld, A Cardona, V Hartenstein, P Tomančák Bioinformatics 25 (15), 1984, 2009 | 373 | 2009 |
Crowdsourcing the creation of image segmentation algorithms for connectomics I Arganda-Carreras, SC Turaga, DR Berger, D Ciresan, A Giusti, ... Frontiers in Neuroanatomy 9, 142, 2015 | 360 | 2015 |
Elastic volume reconstruction from series of ultra-thin microscopy sections S Saalfeld, R Fetter, A Cardona, P Tomancak Nature Methods 9 (7), 717-720, 2012 | 319 | 2012 |
Quantitative neuroanatomy for connectomics in Drosophila CM Schneider-Mizell, S Gerhard, M Longair, T Kazimiers, F Li, MF Zwart, ... eLife 5, e12059, 2016 | 304 | 2016 |
BigStitcher: reconstructing high-resolution image datasets of cleared and expanded samples D Hörl, F Rojas Rusak, F Preusser, P Tillberg, N Randel, RK Chhetri, ... Nature Methods 16 (9), 870-874, 2019 | 238 | 2019 |
The wiring diagram of a glomerular olfactory system ME Berck, A Khandelwal, L Claus, L Hernandez-Nunez, G Si, CJ Tabone, ... eLife 5, e14859, 2016 | 206 | 2016 |
Sample Drift Correction Following 4D Confocal Time-lapse Imaging A Parslow, A Cardona, RJ Bryson-Richardson JoVE (Journal of Visualized Experiments), e51086-e51086, 2014 | 181 | 2014 |
Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila T Jovanic, CM Schneider-Mizell, M Shao, JB Masson, G Denisov, ... Cell 167 (3), 858-870. e19, 2016 | 166 | 2016 |
Dynamics of zebrafish somitogenesis C Schröter, L Herrgen, A Cardona, GJ Brouhard, B Feldman, AC Oates Developmental Dynamics 237 (3), 545-553, 2008 | 165 | 2008 |
A circuit mechanism for the propagation of waves of muscle contraction in Drosophila A Fushiki, MF Zwart, H Kohsaka, RD Fetter, A Cardona, A Nose eLife 5, e13253, 2016 | 163 | 2016 |
Multicut brings automated neurite segmentation closer to human performance T Beier, C Pape, N Rahaman, T Prange, S Berg, DD Bock, A Cardona, ... Nature Methods 14 (2), 101-102, 2017 | 159 | 2017 |
As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets S Saalfeld, A Cardona, V Hartenstein, P Tomančák Bioinformatics 26 (12), i57-i63, 2010 | 156 | 2010 |
Sensory determinants of behavioral dynamics in Drosophila thermotaxis M Klein, B Afonso, AJ Vonner, L Hernandez-Nunez, M Berck, CJ Tabone, ... Proceedings of the National Academy of Sciences 112 (2), E220-E229, 2015 | 154 | 2015 |