Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement RK Varshney, C Song, RK Saxena, S Azam, S Yu, AG Sharpe, S Cannon, ... Nature biotechnology 31 (3), 240-246, 2013 | 1235 | 2013 |
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis SB Goodwin, SB M'Barek, B Dhillon, AHJ Wittenberg, CF Crane, JK Hane, ... PLoS Genetics 7 (6), e1002070, 2011 | 523 | 2011 |
Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations T Rouxel, J Grandaubert, JK Hane, C Hoede, AP Van de Wouw, ... Nature communications 2 (1), 202, 2011 | 497 | 2011 |
Dothideomycete–plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum JK Hane, RGT Lowe, PS Solomon, KC Tan, CL Schoch, JW Spatafora, ... The Plant Cell 19 (11), 3347-3368, 2007 | 291 | 2007 |
A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant–microbe interactions and legume evolution JK Hane, Y Ming, LG Kamphuis, MN Nelson, G Garg, CA Atkins, PE Bayer, ... Plant Biotechnology Journal 15 (3), 318-330, 2017 | 186 | 2017 |
Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population … VA Manning, I Pandelova, B Dhillon, LJ Wilhelm, SB Goodwin, AM Berlin, ... G3: Genes| Genomes| Genetics 3 (1), 41-63, 2013 | 177 | 2013 |
Genome Sequencing and Comparative Genomics of the Broad Host-Range Pathogen Rhizoctonia solani AG8 JK Hane, JP Anderson, AH Williams, J Sperschneider, KB Singh PLOS Genetics 10 (5), e1004281, 2014 | 170 | 2014 |
Evolution of linked avirulence effectors in Leptosphaeria maculans is affected by genomic environment and exposure to resistance genes in host plants AP Van de Wouw, AJ Cozijnsen, JK Hane, PC Brunner, BA McDonald, ... PLoS pathogens 6 (11), e1001180, 2010 | 169 | 2010 |
RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences J Hane, R Oliver BMC bioinformatics 9 (1), 478, 2008 | 155 | 2008 |
The first gene-based map of Lupinus angustifolius L.-location of domestication genes and conserved synteny with Medicago truncatula MN Nelson, HTT Phan, SR Ellwood, PM Moolhuijzen, J Hane, A Williams, ... Theoretical and Applied Genetics 113, 225-238, 2006 | 154 | 2006 |
CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts AC Testa, JK Hane, SR Ellwood, RP Oliver BMC Genomics 16 (1), 170, 2015 | 147 | 2015 |
Construction of a comparative genetic map in faba bean (Vicia faba L.); conservation of genome structure with Lens culinaris S Ellwood, H Phan, M Jordan, J Hane, A Torres, C Avila, S Cruz-Izquierdo, ... BMC genomics 9 (1), 380, 2008 | 141 | 2008 |
A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi JK Hane, T Rouxel, BJ Howlett, GHJ Kema, SB Goodwin, RP Oliver Genome Biol 12 (5), R45, 2011 | 137 | 2011 |
Extensive macrosynteny between Medicago truncatula and Lens culinaris ssp. culinaris HTT Phan, SR Ellwood, JK Hane, R Ford, M Materne, RP Oliver Theoretical and Applied Genetics 114, 549-558, 2007 | 124 | 2007 |
A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres SR Ellwood, Z Liu, RA Syme, Z Lai, JK Hane, F Keiper, CS Moffat, ... Genome Biol 11 (11), R109, 2010 | 118 | 2010 |
OcculterCut: a comprehensive survey of AT-rich regions in fungal genomes AC Testa, RP Oliver, JK Hane Genome biology and evolution 8 (6), 2044-2064, 2016 | 102 | 2016 |
Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors AH Williams, M Sharma, LF Thatcher, S Azam, JK Hane, J Sperschneider, ... BMC Genomics 17 (1), 1, 2016 | 97 | 2016 |
Accessories make the outfit: accessory chromosomes and other dispensable DNA regions in plant-pathogenic Fungi S Bertazzoni, AH Williams, DA Jones, RA Syme, KC Tan, JK Hane Molecular Plant-Microbe Interactions 31 (8), 779-788, 2018 | 86 | 2018 |
Transcriptome sequencing of different narrow‐leafed lupin tissue types provides a comprehensive uni‐gene assembly and extensive gene‐based molecular markers LG Kamphuis, JK Hane, MN Nelson, L Gao, CA Atkins, KB Singh Plant biotechnology journal 13 (1), 14-25, 2015 | 83 | 2015 |
Adapting legume crops to climate change using genomic approaches. M Mousavi-Derazmahalleh, PE Bayer, JK Hane, V Babu, HT Nguyen, ... Plant, cell & environment, 2018 | 82 | 2018 |