RNA biomarkers: frontier of precision medicine for cancer X Xi, T Li, Y Huang, J Sun, Y Zhu, Y Yang, ZJ Lu Non-coding RNA 3 (1), 9, 2017 | 147 | 2017 |
What are we depressed about when we talk about covid-19: Mental health analysis on tweets using natural language processing I Li, Y Li, T Li, S Alvarez-Napagao, D Garcia-Gasulla, T Suzumura Artificial Intelligence XXXVII: 40th SGAI International Conference on …, 2020 | 72 | 2020 |
Functional genomics data: privacy risk assessment and technological mitigation G Gürsoy, T Li, S Liu, E Ni, CM Brannon, MB Gerstein Nature Reviews Genetics 23 (4), 245-258, 2022 | 35 | 2022 |
TopicNet: a framework for measuring transcriptional regulatory network change S Lou, T Li, X Kong, J Zhang, J Liu, D Lee, M Gerstein Bioinformatics 36 (Supplement_1), i474-i481, 2020 | 25 | 2020 |
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models J Rozowsky, J Gao, B Borsari, YT Yang, T Galeev, G Gürsoy, CB Epstein, ... Cell 186 (7), 1493-1511. e40, 2023 | 22 | 2023 |
Unsupervised cross-domain prerequisite chain learning using variational graph autoencoders I Li, V Yan, T Li, R Qu, D Radev arXiv preprint arXiv:2105.03505, 2021 | 14 | 2021 |
Global data science project for covid-19 summary report D Garcia-Gasulla, SA Napagao, I Li, H Maruyama, H Kanezashi, ... | 9* | 2020 |
LiGCN: label-interpretable graph convolutional networks for multi-label text classification I Li, A Feng, H Wu, T Li, T Suzumura, R Dong arXiv preprint arXiv:2103.14620, 2021 | 6 | 2021 |
Approaches for integrating heterogeneous RNA-seq data reveal cross-talk between microbes and genes in asthmatic patients D Spakowicz, S Lou, B Barron, JL Gomez, T Li, Q Liu, N Grant, X Yan, ... Genome biology 21, 1-22, 2020 | 6 | 2020 |
GRAM: A generalized model to predict the molecular effect of a non-coding variant in a cell-type specific manner S Lou, KA Cotter, T Li, J Liang, H Mohsen, J Liu, J Zhang, S Cohen, J Xu, ... PLoS genetics 15 (8), e1007860, 2019 | 6 | 2019 |
Heterogeneous graph neural networks for multi-label text classification I Li, T Li, Y Li, R Dong, T Suzumura Preprint at https://arxiv. org/abs/2103.14620, 2021 | 4 | 2021 |
A survey of generative ai for de novo drug design: new frontiers in molecule and protein generation X Tang, H Dai, E Knight, F Wu, Y Li, T Li, M Gerstein Briefings in Bioinformatics 25 (4), 2024 | 3 | 2024 |
Disentangled wasserstein autoencoder for t-cell receptor engineering T Li, H Guo, F Grazioli, M Gerstein, MR Min Advances in Neural Information Processing Systems 36, 2024 | 3 | 2024 |
Latent-space embedding of expression data identifies gene signatures from sputum samples of asthmatic patients S Lou, T Li, D Spakowicz, X Yan, GL Chupp, M Gerstein BMC bioinformatics 21, 1-13, 2020 | 3 | 2020 |
Constructing a multiple-layer interactome for SARS-CoV-2 in the context of lung disease: Linking the virus with human genes and co-infecting microbes S Lou, T Li, M Gerstein bioRxiv, 2021.12. 05.471290, 2021 | 1* | 2021 |
Gene Tracer: a smart, interactive, voice-controlled Alexa skill For gene information retrieval and browsing, mutation annotation and network visualization S Lou, T Li, J Liu, M Gerstein Bioinformatics 37 (18), 2998-3000, 2021 | | 2021 |
3D Autoencoding Diffusion Model for Molecule Interpolation and Manipulation T Li, MR Min, H Guo, M Gerstein | | |