An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 16764 | 2012 |
MEME Suite: tools for motif discovery and searching TL Bailey, M Boden, FA Buske, M Frith, CE Grant, L Clementi, J Ren, ... Nucleic acids research 37 (suppl_2), W202-W208, 2009 | 9491 | 2009 |
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007 | 5978 | 2007 |
What is a support vector machine? WS Noble Nature biotechnology 24 (12), 1565-1567, 2006 | 4434 | 2006 |
FIMO: scanning for occurrences of a given motif CE Grant, TL Bailey, WS Noble Bioinformatics 27 (7), 1017-1018, 2011 | 3860 | 2011 |
Knowledge-based analysis of microarray gene expression data by using support vector machines MPS Brown, WN Grundy, D Lin, N Cristianini, CW Sugnet, TS Furey, ... Proceedings of the National Academy of Sciences 97 (1), 262-267, 2000 | 3239 | 2000 |
The MEME suite TL Bailey, J Johnson, CE Grant, WS Noble Nucleic acids research 43 (W1), W39-W49, 2015 | 3020 | 2015 |
The ENCODE (ENCyclopedia of DNA elements) project EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ... Science 306 (5696), 636-640, 2004 | 2385 | 2004 |
Semi-supervised learning for peptide identification from shotgun proteomics datasets L Käll, JD Canterbury, J Weston, WS Noble, MJ MacCoss Nature methods 4 (11), 923-925, 2007 | 2297 | 2007 |
Quantifying similarity between motifs S Gupta, JA Stamatoyannopoulos, TL Bailey, WS Noble Genome biology 8, 1-9, 2007 | 1963 | 2007 |
Machine learning applications in genetics and genomics MW Libbrecht, WS Noble Nature Reviews Genetics 16 (6), 321-332, 2015 | 1952 | 2015 |
Assessing computational tools for the discovery of transcription factor binding sites M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ... Nature biotechnology 23 (1), 137-144, 2005 | 1607 | 2005 |
The spectrum kernel: A string kernel for SVM protein classification C Leslie, E Eskin, WS Noble Biocomputing 2002, 564-575, 2001 | 1502 | 2001 |
Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1258 | 2020 |
Mismatch string kernels for SVM protein classification E Eskin, J Weston, W Noble, C Leslie Advances in neural information processing systems 15, 2002 | 1158 | 2002 |
A three-dimensional model of the yeast genome Z Duan, M Andronescu, K Schutz, S McIlwain, YJ Kim, C Lee, J Shendure, ... Nature 465 (7296), 363-367, 2010 | 1119 | 2010 |
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ... Genome research 22 (9), 1798-1812, 2012 | 1055 | 2012 |
A statistical framework for genomic data fusion GRG Lanckriet, T De Bie, N Cristianini, MI Jordan, WS Noble Bioinformatics 20 (16), 2626-2635, 2004 | 903 | 2004 |
How does multiple testing correction work? WS Noble Nature biotechnology 27 (12), 1135-1137, 2009 | 861 | 2009 |
Kernel methods for predicting protein–protein interactions A Ben-Hur, WS Noble Bioinformatics 21 (suppl_1), i38-i46, 2005 | 803 | 2005 |