Integrative analysis of 111 reference human epigenomes A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ... Nature 518 (7539), 317-330, 2015 | 6097 | 2015 |
Human DNA methylomes at base resolution show widespread epigenomic differences R Lister, M Pelizzola, RH Dowen, RD Hawkins, G Hon, J Tonti-Filippini, ... nature 462 (7271), 315-322, 2009 | 5265 | 2009 |
Highly integrated single-base resolution maps of the epigenome in Arabidopsis R Lister, RC O'Malley, J Tonti-Filippini, BD Gregory, CC Berry, AH Millar, ... Cell 133 (3), 523-536, 2008 | 2805 | 2008 |
Global epigenomic reconfiguration during mammalian brain development R Lister, EA Mukamel, JR Nery, M Urich, CA Puddifoot, ND Johnson, ... Science 341 (6146), 1237905, 2013 | 1924 | 2013 |
Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells R Lister, M Pelizzola, YS Kida, RD Hawkins, JR Nery, G Hon, ... Nature 471 (7336), 68-73, 2011 | 1811 | 2011 |
Widespread dynamic DNA methylation in response to biotic stress RH Dowen, M Pelizzola, RJ Schmitz, R Lister, JM Dowen, JR Nery, ... Proceedings of the National Academy of Sciences 109 (32), E2183-E2191, 2012 | 1059 | 2012 |
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells RD Hawkins, GC Hon, LK Lee, QM Ngo, R Lister, M Pelizzola, LE Edsall, ... Cell stem cell 6 (5), 479-491, 2010 | 979 | 2010 |
Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells WA Pastor, UJ Pape, Y Huang, HR Henderson, R Lister, M Ko, ... Nature 473 (7347), 394-397, 2011 | 956 | 2011 |
Genome evolution in the allotetraploid frog Xenopus laevis AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda, S Takahashi, ... Nature 538 (7625), 336-343, 2016 | 946 | 2016 |
Epigenomic analysis of multilineage differentiation of human embryonic stem cells W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ... Cell 153 (5), 1134-1148, 2013 | 778 | 2013 |
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ... Nature biotechnology 28 (10), 1097-1105, 2010 | 767 | 2010 |
A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ... Nature neuroscience 22 (12), 2087-2097, 2019 | 697 | 2019 |
Epigenomic signatures of neuronal diversity in the mammalian brain A Mo, EA Mukamel, FP Davis, C Luo, GL Henry, S Picard, MA Urich, ... Neuron 86 (6), 1369-1384, 2015 | 668 | 2015 |
Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer GC Hon, RD Hawkins, OL Caballero, C Lo, R Lister, M Pelizzola, ... Genome research 22 (2), 246-258, 2012 | 586 | 2012 |
Finding the fifth base: genome-wide sequencing of cytosine methylation R Lister, JR Ecker Genome research 19 (6), 959-966, 2009 | 457 | 2009 |
A link between RNA metabolism and silencing affecting Arabidopsis development BD Gregory, RC O'Malley, R Lister, MA Urich, J Tonti-Filippini, H Chen, ... Developmental cell 14 (6), 854-866, 2008 | 449 | 2008 |
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows E Denisenko, BB Guo, M Jones, R Hou, L De Kock, T Lassmann, D Poppe, ... Genome biology 21, 1-25, 2020 | 428 | 2020 |
Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana R Clifton, R Lister, KL Parker, PG Sappl, D Elhafez, AH Millar, DA Day, ... Plant molecular biology 58, 193-212, 2005 | 395 | 2005 |
Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond R Lister, BD Gregory, JR Ecker Current opinion in plant biology 12 (2), 107-118, 2009 | 379 | 2009 |
Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements D Secco, C Wang, H Shou, MD Schultz, S Chiarenza, L Nussaume, ... elife 4, e09343, 2015 | 347 | 2015 |