| The barley pan-genome reveals the hidden legacy of mutation breeding M Jayakodi, S Padmarasu, G Haberer, VS Bonthala, H Gundlach, ... Nature 588 (7837), 284-289, 2020 | 398 | 2020 |
| Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement ZJ Chen, A Sreedasyam, A Ando, Q Song, LM De Santiago, ... Nature genetics 52 (5), 525-533, 2020 | 306 | 2020 |
| Long-read sequence assembly: a technical evaluation in barley M Mascher, T Wicker, J Jenkins, C Plott, T Lux, CS Koh, J Ens, ... The Plant Cell 33 (6), 1888-1906, 2021 | 222 | 2021 |
| Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass JT Lovell, AH MacQueen, S Mamidi, J Bonnette, J Jenkins, JD Napier, ... Nature 590 (7846), 438-444, 2021 | 171 | 2021 |
| Construction and comparison of three reference‐quality genome assemblies for soybean B Valliyodan, SB Cannon, PE Bayer, S Shu, AV Brown, L Ren, J Jenkins, ... The Plant Journal 100 (5), 1066-1082, 2019 | 145 | 2019 |
| The genomic landscape of molecular responses to natural drought stress in Panicum hallii JT Lovell, J Jenkins, DB Lowry, S Mamidi, A Sreedasyam, X Weng, ... Nature communications 9 (1), 5213, 2018 | 100 | 2018 |
| Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors SP Gordon, B Contreras-Moreira, JJ Levy, A Djamei, A Czedik-Eysenberg, ... Nature Communications 11 (1), 3670, 2020 | 74 | 2020 |
| Dynamic genome evolution in a model fern DB Marchant, G Chen, S Cai, F Chen, P Schafran, J Jenkins, S Shu, ... Nature Plants 8 (9), 1038-1051, 2022 | 72 | 2022 |
| Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding JT Lovell, NB Bentley, G Bhattarai, JW Jenkins, A Sreedasyam, Y Alarcon, ... Nature communications 12 (1), 4125, 2021 | 58 | 2021 |
| Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C4 grass JT Lovell, S Schwartz, DB Lowry, EV Shakirov, JE Bonnette, X Weng, ... Genome research 26 (4), 510-518, 2016 | 52 | 2016 |
| Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders SM Hiatt, JMJ Lawlor, LH Handley, RC Ramaker, BB Rogers, ... Human Genetics and Genomics Advances 2 (2), 2021 | 47 | 2021 |
| Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics AL Healey, B Piatkowski, JT Lovell, A Sreedasyam, SB Carey, S Mamidi, ... Nature Plants 9 (2), 238-254, 2023 | 25 | 2023 |
| JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom A Sreedasyam, C Plott, MS Hossain, JT Lovell, J Grimwood, JW Jenkins, ... Nucleic acids research 51 (16), 8383-8401, 2023 | 19 | 2023 |
| The western redcedar genome reveals low genetic diversity in a self-compatible conifer TJ Shalev, OG El-Dien, MMS Yuen, S Shengqiang, SD Jackman, ... Genome research 32 (10), 1952-1964, 2022 | 19 | 2022 |
| Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet KM Devos, P Qi, BA Bahri, DM Gimode, K Jenike, SJ Manthi, D Lule, ... Nature communications 14 (1), 3694, 2023 | 16 | 2023 |
| The recent evolutionary rescue of a staple crop depended on over half a century of global germplasm exchange KT Muleta, T Felderhoff, N Winans, R Walstead, JR Charles, JS Armstrong, ... Science Advances 8 (6), eabj4633, 2022 | 16 | 2022 |
| Genomic variation within the maize stiff‐stalk heterotic germplasm pool N Bornowski, KJ Michel, JP Hamilton, S Ou, AS Seetharam, J Jenkins, ... The plant genome 14 (3), e20114, 2021 | 15 | 2021 |
| Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae RG Dorrell, A Kuo, Z Füssy, EH Richardson, A Salamov, N Zarevski, ... Life Science Alliance 6 (3), 2023 | 14 | 2023 |
| Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs JV Bredeson, AB Mudd, S Medina-Ruiz, T Mitros, OK Smith, KE Miller, ... Nature Communications 15 (1), 579, 2024 | 13 | 2024 |
| The Common Bean V Gene Encodes Flavonoid 3′5′ Hydroxylase: A Major Mutational Target for Flavonoid Diversity in Angiosperms PE McClean, R Lee, K Howe, C Osborne, J Grimwood, S Levy, ... Frontiers in Plant Science 13, 869582, 2022 | 10 | 2022 |
