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Weisi Xie
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Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues
AK Glaser, NP Reder, Y Chen, C Yin, L Wei, S Kang, LA Barner, W Xie, ...
Nature communications 10 (1), 2781, 2019
1822019
Prostate cancer risk stratification via nondestructive 3D pathology with deep learning–assisted gland analysis
W Xie, NP Reder, C Koyuncu, P Leo, S Hawley, H Huang, C Mao, ...
Cancer research 82 (2), 334-345, 2022
672022
Rapid pathology of lumpectomy margins with open-top light-sheet (OTLS) microscopy
Y Chen, W Xie, AK Glaser, NP Reder, C Mao, SM Dintzis, JC Vaughan, ...
Biomedical optics express 10 (3), 1257-1272, 2019
642019
Microscopy with ultraviolet surface excitation for wide-area pathology of breast surgical margins
W Xie, Y Chen, Y Wang, L Wei, C Yin, AK Glaser, ME Fauver, EJ Seibel, ...
Journal of Biomedical Optics 24 (2), 026501-026501, 2019
522019
FalseColor-Python: a rapid intensity-leveling and digital-staining package for fluorescence-based slide-free digital pathology
R Serafin, W Xie, AK Glaser, JTC Liu
Plos one 15 (10), e0233198, 2020
392020
Utilizing a Pyrazine‐Containing Aggregation‐Induced Emission Luminogen as an Efficient Photosensitizer for Imaging‐Guided Two‐Photon Photodynamic Therapy
M Chen, W Xie, D Li, A Zebibula, Y Wang, J Qian, A Qin, BZ Tang
Chemistry–A European Journal 24 (62), 16603-16608, 2018
242018
Diagnosing 12 prostate needle cores within an hour of biopsy via open-top light-sheet microscopy
W Xie, AK Glaser, F Vakar-Lopez, JL Wright, NP Reder, JTC Liu, LD True
Journal of Biomedical Optics 25 (12), 126502-126502, 2020
212020
Non-destructive 3D pathology with analysis of nuclear features for prostate cancer risk assessment
R Serafin, W Xie, C Koyuncu, JTC Liu
Clinical and Translational Biophotonics, TM2B. 3, 2022
132022
Aggregation-induced emission nanoparticles for in vivo three-photon fluorescence microscopic rat brain angiography
H Zhang, W Xie, M Chen, L Zhu, Z Feng, Y Wang, W Xi, BZ Tang, J Qian
Journal of Innovative Optical Health Sciences 12 (06), 1950012, 2019
112019
Comprehensive surface histology of fresh resection margins with rapid open-top light-sheet (OTLS) microscopy
G Gao, D Miyasato, LA Barner, R Serafin, KW Bishop, W Xie, AK Glaser, ...
IEEE Transactions on Biomedical Engineering, 2023
62023
Prostate cancer risk stratification via non-destructive 3D pathology with annotation-free gland segmentation and analysis
W Xie, NP Reder, C Koyuncu, P Leo, S Hawley, H Huang, C Mao, ...
medRxiv, 2021.08. 30.21262847, 2021
32021
Microscopy with Ultraviolet Surface Excitation (MUSE) for Rapid Intraoperative Pathology of Breast Surgical Margins
W Xie, Y Chen, Y Wang, L Wei, C Yin, AK Glaser, ME Fauver, EJ Seibel, ...
Novel Techniques in Microscopy, JW4C. 3, 2019
22019
Direct three-dimensional segmentation of prostate glands with nnU-Net
R Wang, SSL Chow, RB Serafin, W Xie, Q Han, E Baraznenok, L Lan, ...
Journal of Biomedical Optics 29 (3), 036001-036001, 2024
12024
Abstract PO-017: Annotation-free 3D gland segmentation with generative image-sequence translation for prostate cancer risk assessment
W Xie, A Glaser, N Reder, N Postupna, C Mao, C Koyuncu, P Leo, ...
Clinical Cancer Research 27 (5_Supplement), PO-017-PO-017, 2021
12021
Method development and feasibility assessment for diagnosing 12 needle cores within an hour of biopsy
W Xie, AK Glaser, F Vakar-Lopez, NP Reder, LD True, JTC Liu
Clinical and Translational Biophotonics, TTh4B. 4, 2020
12020
Apparatuses, systems and methods for generating synthetic image sets
JTC Liu, W Xie, NP Reder
US Patent App. 18/271,203, 2024
2024
Abstract B050: Human interpretation of 3D histopathology image datasets of whole prostate biopsies reveals more cribriform pattern (Gleason pattern 4) carcinoma than is seen in …
LD True, PA Humphrey, V Roybal, SLS Chow, W Xie, JTC Liu
Cancer Research 83 (11_Supplement), B050-B050, 2023
2023
3D pathology of prostate biopsies with biochemical recurrence outcomes: raw H&E-analog datasets and image translation-assisted segmentation in 3D (ITAS3D) datasets …
W Xie, NP Reder, C Koyuncu, P Leo, S Hawley, H Huang, C Mao, ...
The Cancer Imaging Archive, 2023
2023
Deep Learning-assisted 3D Segmentation and Analysis of Prostate Glands for Cancer Risk Stratification
W Xie, NP Reder, C Koyuncu, P Leo, S Hawley, H Huang, C Mao, ...
Microscopy Histopathology and Analytics, MS4A. 4, 2022
2022
Thick-tissue Tri-labeling with Immunofluorescence and a Fluorescent Analog of H&E for Image-translation-assisted Segmentation in 3D (ITAS3D)
W Xie, N Postupna, C Mao, CD Keene, JC Vaughan, AK Glaser, JTC Liu
Optics and the Brain, JM3A. 42, 2022
2022
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