Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation D Vu, M Groenewald, M De Vries, T Gehrmann, B Stielow, U Eberhardt, ... Studies in mycology 92 (1), 135-154, 2019 | 883 | 2019 |
Mycobacterium tuberculosis whole genome sequences from Southern India suggest novel resistance mechanisms and the need for region-specific diagnostics AL Manson, T Abeel, JE Galagan, JC Sundaramurthi, A Salazar, ... Clinical Infectious Diseases 64 (11), 1494-1501, 2017 | 69 | 2017 |
Transcription factors of Schizophyllum commune involved in mushroom formation and modulation of vegetative growth JF Pelkmans, MB Patil, T Gehrmann, MJT Reinders, HAB Wösten, ... Scientific Reports 7 (1), 310, 2017 | 65 | 2017 |
Nucleus-specific expression in the multinuclear mushroom-forming fungus Agaricus bisporus reveals different nuclear regulatory programs T Gehrmann, JF Pelkmans, RA Ohm, AM Vos, ASM Sonnenberg, ... Proceedings of the National Academy of Sciences 115 (17), 4429-4434, 2018 | 63 | 2018 |
Phyllosticta citricarpa and sister species of global importance to Citrus V Guarnaccia, T Gehrmann, GJ Silva‐Junior, PH Fourie, S Haridas, D Vu, ... Molecular Plant Pathology 20 (12), 1619-1635, 2019 | 61 | 2019 |
The transcriptional regulator c2h2 accelerates mushroom formation in Agaricus bisporus JF Pelkmans, AM Vos, K Scholtmeijer, E Hendrix, JJP Baars, T Gehrmann, ... Applied Microbiology and Biotechnology 100, 7151-7159, 2016 | 57 | 2016 |
A citizen-science-enabled catalogue of the vaginal microbiome and associated factors S Lebeer, S Ahannach, T Gehrmann, S Wittouck, T Eilers, E Oerlemans, ... Nature Microbiology 8 (11), 2183-2195, 2023 | 43* | 2023 |
Schizophyllum commune has an extensive and functional alternative splicing repertoire T Gehrmann, JF Pelkmans, LG Lugones, HAB Wösten, T Abeel, ... Scientific reports 6 (1), 33640, 2016 | 28 | 2016 |
Randomized, double-blind, placebo-controlled trial of a throat spray with selected lactobacilli in COVID-19 outpatients I De Boeck, E Cauwenberghs, I Spacova, T Gehrmann, T Eilers, ... Microbiology spectrum 10 (5), e01682-22, 2022 | 24 | 2022 |
The Genetic Makeup and Expression of the Glycolytic and Fermentative Pathways Are Highly Conserved Within the Saccharomyces Genus FJ Boonekamp, S Dashko, M Van den Broek, T Gehrmann, JM Daran, ... Frontiers in genetics 9, 504, 2018 | 23 | 2018 |
Patterns of conservation and diversification in the fungal polarization network ET Diepeveen, T Gehrmann, V Pourquié, T Abeel, L Laan Genome Biology and Evolution 10 (7), 1765-1782, 2018 | 19 | 2018 |
Design and experimental evaluation of a minimal, innocuous watermarking strategy to distinguish near-identical DNA and RNA sequences FJ Boonekamp, S Dashko, D Duiker, T Gehrmann, M van den Broek, ... ACS Synthetic Biology 9 (6), 1361-1375, 2020 | 12 | 2020 |
Proteny: discovering and visualizing statistically significant syntenic clusters at the proteome level T Gehrmann, MJT Reinders Bioinformatics 31 (21), 3437-3444, 2015 | 11 | 2015 |
PLIS: A metabolomic response monitor to a lifestyle intervention study in older adults FA Bogaards, T Gehrmann, M Beekman, EB Van Den Akker, ... FASEB journal: official publication of the Federation of American Societies …, 2022 | 4 | 2022 |
Conditional random fields for protein function prediction T Gehrmann, M Loog, MJT Reinders, D de Ridder Pattern Recognition in Bioinformatics: 8th IAPR International Conference …, 2013 | 3 | 2013 |
A combined lifestyle intervention induces a sensitization of the blood transcriptomic response to a nutrient challenge T Gehrmann, M Beekman, J Deelen, L Partridge, O van de Rest, L Mei, ... bioRxiv, 2021.05. 18.444591, 2021 | 2 | 2021 |
Genetic diversity and population structure in bryophyte with facultative nannandry AS Lang, T Gehrmann, N Cronberg Frontiers in Plant Science 12, 517547, 2021 | 2 | 2021 |
Bioinformatic analysis of genomic and transcriptomic variation in fungi T Gehrmann Ecol Monogr 87, e98438, 2018 | 2 | 2018 |
Microbial and seminal traces of sexual intercourse and forensic implications S Ahannach, T Gehrmann, I Spacova, S Wittouck, J Hiers, P Bron, ... | 1 | 2024 |
Recent insights into the vaginal microbiota S Condori, S Ahannach, L Vander Donck, E Oerlemans, J Dillen, C Dricot, ... Microbiota in Health and Disease 4 (3), 2022 | 1 | 2022 |