| Genomic evidence of past and future climate-linked loss in a migratory Arctic fish KKS Layton, PVR Snelgrove, JB Dempson, T Kess, SJ Lehnert, P Bentzen, ... Nature Climate Change 11 (2), 158-165, 2021 | 56 | 2021 |
| Resolving fine‐scale population structure and fishery exploitation using sequenced microsatellites in a northern fish KKS Layton, B Dempson, PVR Snelgrove, SJ Duffy, AM Messmer, ... Evolutionary Applications 13 (5), 1055-1068, 2020 | 45 | 2020 |
| A SNP Based Linkage Map of the Arctic Charr (Salvelinus alpinus) Genome Provides Insights into the Diploidization Process After Whole Genome Duplication CM Nugent, AA Easton, JD Norman, MM Ferguson, RG Danzmann G3: Genes, Genomes, Genetics 7 (2), 543-556, 2017 | 38 | 2017 |
| Association of biologic prescribing for inflammatory bowel disease with industry payments to physicians R Khan, CM Nugent, MA Scaffidi, N Gimpaya, SC Grover JAMA Internal Medicine, 2019 | 29 | 2019 |
| Design and characterization of an 87k SNP genotyping array for Arctic charr (Salvelinus alpinus) CM Nugent, JS Leong, KA Christensen, EB Rondeau, MK Brachmann, ... PLoS One 14 (4), e0215008, 2019 | 29 | 2019 |
| coil: an R package for cytochrome c oxidase I (COI) DNA barcode data cleaning, translation, and error evaluation CM Nugent, TA Elliott, S Ratnasingham, SJ Adamowicz Genome 63 (6), 291-305, 2020 | 26 | 2020 |
| Limited genetic parallelism underlies recent, repeated incipient speciation in geographically proximate populations of an Arctic fish (Salvelinus alpinus) SJ Salisbury, GR McCracken, R Perry, D Keefe, KKS Layton, T Kess, ... Molecular Ecology 29 (22), 4280-4294, 2020 | 25 | 2020 |
| Retraction: The Arctic charr (Salvelinus alpinus) genome and transcriptome assembly KA Christensen, EB Rondeau, DR Minkley, JS Leong, CM Nugent, ... PLoS One 16 (2), e0247083, 2021 | 18 | 2021 |
| Alignment-free classification of COI DNA barcode data with the Python package Alfie CM Nugent, SJ Adamowicz Metabarcoding and Metagenomics 4, e55815, 2020 | 16 | 2020 |
| Genomic basis of deep‐water adaptation in Arctic Charr (Salvelinus alpinus) morphs T Kess, JB Dempson, SJ Lehnert, KKS Layton, A Einfeldt, P Bentzen, ... Molecular Ecology 30 (18), 4415-4432, 2021 | 14 | 2021 |
| The Genomic Consistency of the Loss of Anadromy in an Arctic Fish (Salvelinus alpinus) SJ Salisbury, GR McCracken, R Perry, D Keefe, KKS Layton, T Kess, ... The American Naturalist 199 (5), 617-635, 2022 | 9 | 2022 |
| Genomic and machine learning‐based screening of aquaculture‐associated introgression into at‐risk wild North American Atlantic salmon (Salmo salar) populations CM Nugent, T Kess, MK Brachmann, BL Langille, MK Holborn, SV Beck, ... Molecular Ecology Resources, 2023 | 5 | 2023 |
| Debar: A sequence‐by‐sequence denoiser for COI‐5P DNA barcode data CM Nugent, TA Elliott, S Ratnasingham, PDN Hebert, SJ Adamowicz Molecular Ecology Resources 21 (8), 2832-2846, 2021 | 4 | 2021 |
| Whole‐genome sequencing reveals fine‐scale environment‐associated divergence near the range limits of a temperate reef fish CM Nugent, T Kess, MK Brachmann, BL Langille, SJ Duffy, SJ Lehnert, ... Molecular Ecology 32 (17), 4742-4762, 2023 | 2 | 2023 |
| Parallel genomic basis of age at maturity across spatial scales in Atlantic Salmon T Kess, SJ Lehnert, P Bentzen, S Duffy, A Messmer, JB Dempson, ... bioRxiv, 2022.09. 09.507321, 2022 | 2 | 2022 |
| Fine‐scale environmentally associated spatial structure of lumpfish (Cyclopterus lumpus) across the Northwest Atlantic BL Langille, T Kess, M Brachmann, CM Nugent, A Messmer, SJ Duffy, ... Evolutionary Applications 16 (9), 1619-1636, 2023 | 1 | 2023 |
| The Arctic charr (Salvelinus alpinus) genome: An analysis of evolutionary change after whole genome duplication C Nugent University of Guelph, 2019 | 1 | 2019 |
| Trans-Atlantic genomic differentiation and parallel environmental and allelic variation in Lumpfish (Cyclopterus lumpus ) BL Langille, T Kess, CM Nugent, A Messmer, SJ Duffy, TM Knutsen, ... ICES Journal of Marine Science, fsae057, 2024 | | 2024 |
| Post‐glacial recolonization and multiple scales of secondary contact contribute to contemporary Atlantic salmon (Salmo salar) genomic variation in North America CM Nugent, T Kess, BL Langille, SV Beck, S Duffy, A Messmer, N Smith, ... Journal of Biogeography, 2024 | | 2024 |
| Variable parallelism in the genomic basis of age at maturity across spatial scales in Atlantic Salmon T Kess, SJ Lehnert, P Bentzen, S Duffy, A Messmer, JB Dempson, ... Ecology and Evolution 14 (4), e11068, 2024 | | 2024 |
