The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ... Science 378 (6615), eabq5358, 2022 | 97 | 2022 |
Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans PM Ashton, LT Thanh, PH Trieu, D Van Anh, NM Trinh, J Beardsley, ... Nature communications 10 (1), 2035, 2019 | 55 | 2019 |
Development of a candidate reference material for adventitious virus detection in vaccine and biologicals manufacturing by deep sequencing ET Mee, MD Preston, PD Minor, S Schepelmann, X Huang, J Nguyen, ... Vaccine 34 (17), 2035-2043, 2016 | 42 | 2016 |
Isolation of vaccine-like poliovirus strains in sewage samples from the United Kingdom M Majumdar, D Klapsa, T Wilton, J Akello, C Anscombe, D Allen, ET Mee, ... The Journal of Infectious Diseases 217 (8), 1222-1230, 2018 | 30 | 2018 |
Distinct clinical and immunological profiles of patients with evidence of SARS-CoV-2 infection in sub-Saharan Africa B Morton, KG Barnes, C Anscombe, K Jere, P Matambo, J Mandolo, ... Nature communications 12 (1), 3554, 2021 | 27 | 2021 |
Challenges of the unknown: clinical application of microbial metagenomics G Rose, DJ Wooldridge, C Anscombe, ET Mee, RV Misra, S Gharbia International Journal of Genomics 2015 (1), 292950, 2015 | 18 | 2015 |
Cost of wastewater-based environmental surveillance for SARS-CoV-2: Evidence from pilot sites in Blantyre, Malawi and Kathmandu, Nepal LG Ngwira, B Sharma, KB Shrestha, S Dahal, R Tuladhar, G Manthalu, ... PLOS Global Public Health 2 (12), e0001377, 2022 | 15 | 2022 |
A comparison of four epidemic waves of COVID-19 in Malawi; an observational cohort study C Anscombe, S Lissauer, H Thole, J Rylance, D Dula, M Menyere, ... BMC Infectious Diseases 23 (1), 79, 2023 | 14 | 2023 |
Detection and characterization of human pegivirus 2, Vietnam NT Anh, NTT Hong, TT Thanh, C Anscombe, TTT Thanh, CY Lau, ... Emerging infectious diseases 24 (11), 2063, 2018 | 10 | 2018 |
A Rapid and Sensitive Diagnostic Screening Assay for Detection of Mycobacteria Including Mycobacterium tuberculosis Directly from Sputum without Extraction LJ Cross, C Anscombe, TD McHugh, I Abubakar, RJ Shorten, N Thorne, ... International journal of bacteriology 2015 (1), 593745, 2015 | 10 | 2015 |
Utilizing river and wastewater as a SARS-CoV-2 surveillance tool in settings with limited formal sewage systems KG Barnes, JI Levy, J Gauld, J Rigby, O Kanjerwa, CB Uzzell, ... Nature Communications 14 (1), 7883, 2023 | 9 | 2023 |
Enterovirus D68 in Viet Nam (2009-2015) NTH Ny, NT Anh, VTT Hang, LA Nguyet, TT Thanh, NNQ Minh, A McBride, ... Wellcome open research 2, 2017 | 9 | 2017 |
FLASH-TB: an application of next-generation CRISPR to detect drug resistant tuberculosis from direct sputum TTB Tram, VTN Ha, LPT Trieu, PM Ashton, ED Crawford, DDA Thu, ... Journal of Clinical Microbiology 61 (4), e01634-22, 2023 | 6 | 2023 |
Distribution and origins of Mycobacterium tuberculosis L4 in Southeast Asia PM Ashton, J Cha, C Anscombe, NTT Thuong, GE Thwaites, TM Walker Microbial Genomics 9 (2), 000955, 2023 | 6 | 2023 |
Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans. Nat Commun 10: 2035 PM Ashton, LT Thanh, PH Trieu, D Van Anh, NM Trinh, J Beardsley, ... | 5 | 2019 |
Whole genome amplification and sequencing of low cell numbers directly from a bacteria spiked blood model C Anscombe, RV Misra, S Gharbia bioRxiv, 153965, 2017 | 5 | 2017 |
Genomically informed clinical comparison of three epidemic waves of COVID-19 in Malawi C Anscombe, S Lissauer, H Thole, J Rylance, D Dula, M Menyere medRxiv, 2022 | 3 | 2022 |
In depth analysis of patients with severe SARS-CoV-2 in sub-Saharan Africa demonstrates distinct clinical and immunological profiles B Morton, KG Barnes, C Anscombe, K Jere, R Kamng’ona, C Brown, ... medRxiv, 2021 | 2 | 2021 |
Viral etiology of community-acquired infection in Vietnam: unraveling the unknown by next-generation sequencing analysis AT Nguyen, N Le, H Nguyen, T Tran, C Anscombe, CY Lau, ... International Journal of Infectious Diseases 79, 115, 2019 | 2 | 2019 |
Genomics of Cryptococcus neoformans PM Ashton, LT Thanh, PH Trieu, D Van Anh, NM Trinh, J Beardsley, ... bioRxiv, 356816, 2018 | 2 | 2018 |