| Multiview learning for understanding functional multiomics ND Nguyen, D Wang PLOS Computational Biology 16 (4), e1007677, 2020 | 104 | 2020 |
| ECMarker: Interpretable machine learning model identifies gene expression biomarkers predicting clinical outcomes and reveals molecular mechanisms of human disease in early stages T Jin*, ND Nguyen*, F Talos, D Wang, (*equal contributions) Bioinformatics 37 (8), 1115-1124, 2021 | 33 | 2021 |
| ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks ND Nguyen, IK Blaby, D Wang BMC genomics 20, 1-14, 2019 | 33 | 2019 |
| A deep manifold-regularized learning model for improving phenotype prediction from multi-modal data ND Nguyen, J Huang, D Wang Nature Computational Science 2 (1), 38-46, 2022 | 26 | 2022 |
| Varmole: a biologically drop-connect deep neural network model for prioritizing disease risk variants and genes ND Nguyen, T Jin, D Wang Bioinformatics 37 (12), 1772-1775, 2021 | 21 | 2021 |
| A unified analysis of atlas single cell data H Chen, ND Nguyen, M Ruffalo, Z Bar-Joseph bioRxiv, 2022.08. 06.503038, 2022 | 2 | 2022 |
| Intratumor heterogeneity and clonal dynamics underlying treatment resistance in prostate cancer LF Tshering, F Luo, ND Nguyen, JG Rail, T Jin, D Wang, F Talos Cancer Research 81 (13_Supplement), 3126-3126, 2021 | 1 | 2021 |
| Optimal transport for mapping senescent cells in spatial transcriptomics ND Nguyen, L Rosas, T Khaliullin, P Jiang, E Hasanaj, JA Ovando, ... bioRxiv, 2023.08. 16.553591, 2023 | | 2023 |
| Interpretable Multiview Learning for Understanding Functional Multiomics ND Nguyen State University of New York at Stony Brook, 2021 | | 2021 |
| A Manifold Learning Based Approach to Reveal the Functional Linkages across Multiple Gene Networks N Nguyen, I Blaby, D Wang Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018 | | 2018 |
| ManiNetCluster: A Manifold Learning Approach to Reveal the Functional Linkages Across Multiple Gene Networks ND Nguyen, IK Blaby, D Wang bioRxiv, 470195, 2018 | | 2018 |
| APPLICATIONS OF COMPLEX NETWORKS IN SOFTWARE ENGINEERING: A SURVEY ND Nguyen | | |
| A novel manifold learning approach to reveal the functional links between gene networks ND Nguyen, IK Blaby, D Wang | | |
| ManiNetCluster: A Manifold Learning Approach to Reveal the Functional Linkages across Multiple Gene Networks I Blaby, N Nguyen, D Wang Plant and Animal Genome XXVII Conference (January 12-16, 2019), 0 | | |
