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Yuchen Yang
Yuchen Yang
School of Ecology, Sun Yat-sen University
在 mail.sysu.edu.cn 的电子邮件经过验证 - 首页
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引用次数
引用次数
年份
Direct cell reprogramming: approaches, mechanisms and progress
H Wang, Y Yang, J Liu, L Qian
Nature Reviews Molecular Cell Biology 22, 410–424, 2021
2442021
SAFE-clustering: Single-cell Aggregated (From Ensemble) Clustering for Single-cell RNA-seq Data
Y Yang, R Huh, H Culpepper, Y Lin, M Love, Y Li
Bioinformatics 35 (8), 1269-1277, 2019
1102019
MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments
I Juric, M Yu, A Abnousi, R Raviram, R Fang, Y Zhao, Y Zhang, Y Qiu, ...
PLoS Computational Biology 15 (4), e1006982, 2019
992019
Dimensionality reduction by UMAP reinforces sample heterogeneity analysis in bulk transcriptomic data
Y Yang, H Sun, Y Zhang, T Zhang, J Gong, Y Wei, YG Duan, M Shu, ...
Cell Reports 36 (4), 109442, 2021
832021
SAME-clustering: Single-cell Aggregated Clustering via Mixture Model Ensemble
R Huh, Y Yang, Y Jiang, Y Shen, Y Li
Nucleic Acids Research 48 (1), 86-95, 2020
662020
Common variants contribute to intrinsic human brain functional networks
B Zhao, T Li, SM Smith, D Xiong, X Wang, Y Yang, T Luo, Z Zhu, Y Shan, ...
Nature Genetics 54, 508–517, 2022
602022
Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits
P Giusti-Rodríguez, L Lu, Y Yang, CA Crowley, X Liu, I Juric, JS Martin, ...
BioRxiv, 406330, 2018
602018
SnapHiC: a computational pipeline to identify chromatin loops from single cell Hi-C data
M Yu, A Abnousi, Y Zhang, G Li, L Lee, Z Chen, R Fang, T Lagler, Y Yang, ...
Nature Methods 18, 1056–1059, 2021
492021
Extremely low genetic diversity across mangrove taxa reflects past sea level changes and hints at poor future responses
Z Guo, X Li, Z He, Y Yang, W Wang, C Zhong, AJ Greenberg, CI Wu, ...
Global Change Biology 24 (4), 1741–1748, 2018
492018
Effects of Pleistocene sea-level fluctuations on mangrove population dynamics: A lesson from Sonneratia alba
Y Yang, J Li, S Yang, X Li, L Fang, C Zhong, NC Duke, R Zhou, S Shi
BMC Evolutionary Biology 17, 22, 2017
462017
Down-regulation of Beclin1 promotes direct cardiac reprogramming
L Wang, H Ma, P Huang, Y Xie, D Near, H Wang, J Xu, Y Yang, Y Xu, ...
Science Translational Medicine 12 (566), eaay7856, 2020
452020
Re-Evaluation of Phylogenetic Relationships among Species of the Mangrove Genus Avicennia from Indo-West Pacific Based on Multilocus Analyses
X Li, NC Duke, Y Yang, L Huang, Y Zhu, Z Zhang, R Zhou, C Zhong, ...
PLoS ONE 11 (10), e0164453, 2016
422016
Transcriptome analysis of the Holly mangrove Acanthus ilicifolius and its terrestrial relative, Acanthus leucostachyus, provides insights into adaptation to intertidal zones
Y Yang, S Yang, J Li, Y Deng, Z Zhang, S Xu, W Guo, C Zhong, R Zhou, ...
BMC Genomics 16, 605, 2015
412015
The circadian clock shapes the Arabidopsis transcriptome by regulating alternative splicing and alternative polyadenylation
Y Yang, Y Li, A Sancar, O Oztas
Journal of Biological Chemistry 295 (22), 7608-7619, 2020
372020
Single Cell Dual-Omics Reveals the Transcriptomic and Epigenomic Diversity of Cardiac Non-myocytes
L Wang, Y Yang, H Ma, Y Xie, J Xu, D Near, H Wang, T Garbutt, Y Li, J Liu, ...
Cardiovascular Research 118, 1548–1563, 2021
362021
A comprehensive comparison on cell-type composition inference for spatial transcriptomics data
J Chen, W Liu, T Luo, Z Yu, M Jiang, J Wen, GP Gupta, P Giusti, H Zhu, ...
Briefings in Bioinformatics 23 (4), bbac245, 2022
342022
Molecular dissection of cadmium-responsive transcriptome profile in a low-cadmium-accumulating cultivar of Brassica parachinensis
Q Zhou, Y Yang, Z Yang
Ecotoxicology and Environmental Safety 176, 85-94, 2019
342019
Molecular adaptation to salinity fluctuation in tropical intertidal environments of a mangrove tree Sonneratia alba
X Feng, S Xu, J Li, Y Yang, Q Chen, H Lyu, C Zhong, Z He, S Shi
BMC Plant Biology 20, 178, 2020
332020
Comparative analysis between low- and high-cadmium-accumulating cultivars of Brassica parachinensis to identify difference of cadmium-induced microRNA and their targets
Q Zhou, YC Yang, C Shen, CT He, JG Yuan, ZY Yang
Plant and Soil 420 (1-2), 223-237, 2017
322017
Mucosal Associated Invariant T (MAIT) Cell Responses Differ by Sex in COVID-19
C Yu, S Littleton, N Giroux, R Mathew, S Ding, J Kalnitsky, Y Yang, ...
Med 2 (6), 755-772, 2021
312021
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