Genome-wide discovery of somatic coding and noncoding mutations in pediatric endemic and sporadic Burkitt lymphoma BM Grande, DS Gerhard, A Jiang, NB Griner, JS Abramson, TB Alexander, ... Blood, The Journal of the American Society of Hematology 133 (12), 1313-1324, 2019 | 222 | 2019 |
Interactions of Aspergillus fumigatus conidia with airway epithelial cells: a critical review CA Croft, L Culibrk, MM Moore, SJ Tebbutt Frontiers in microbiology 7, 472, 2016 | 156 | 2016 |
Altered gene expression along the glycolysis–cholesterol synthesis axis is associated with outcome in pancreatic cancer JM Karasinska, JT Topham, SE Kalloger, GH Jang, RE Denroche, ... Clinical Cancer Research 26 (1), 135-146, 2020 | 154 | 2020 |
Genome-wide discovery of somatic regulatory variants in diffuse large B-cell lymphoma SE Arthur, A Jiang, BM Grande, M Alcaide, R Cojocaru, CK Rushton, ... Nature communications 9 (1), 1-14, 2018 | 154 | 2018 |
Pan-cancer analysis of advanced patient tumors reveals interactions between therapy and genomic landscapes E Pleasance, E Titmuss, L Williamson, H Kwan, L Culibrk, EY Zhao, ... Nature Cancer 1 (4), 452-468, 2020 | 136 | 2020 |
Analysis of Ugandan cervical carcinomas identifies human papillomavirus clade–specific epigenome and transcriptome landscapes A Gagliardi, VL Porter, Z Zong, R Bowlby, E Titmuss, C Namirembe, ... Nature genetics 52 (8), 800-810, 2020 | 52 | 2020 |
Systems Biology Approaches for Host–Fungal Interactions: An Expanding Multi-Omics Frontier L Culibrk, CA Croft, SJ Tebbutt Omics: a journal of integrative biology 20 (3), 127-138, 2016 | 43 | 2016 |
Text-mining clinically relevant cancer biomarkers for curation into the CIViC database J Lever, MR Jones, AM Danos, K Krysiak, M Bonakdar, JK Grewal, ... Genome medicine 11, 1-16, 2019 | 41 | 2019 |
Transcriptomic and proteomic host response to Aspergillus fumigatus conidia in an air-liquid interface model of human bronchial epithelium A Toor, L Culibrk, GK Singhera, KM Moon, A Prudova, LJ Foster, ... PloS one 13 (12), e0209652, 2018 | 26 | 2018 |
Phagocytosis of Aspergillus fumigatus by Human Bronchial Epithelial Cells Is Mediated by the Arp2/3 Complex and WIPF2 L Culibrk, CA Croft, A Toor, SJ Yang, GK Singhera, DR Dorscheid, ... Frontiers in cellular and infection microbiology 9, 16, 2019 | 17 | 2019 |
Endogenous retrovirus transcript levels are associated with immunogenic signatures in multiple metastatic cancer types JT Topham, E Titmuss, ED Pleasance, LM Williamson, JM Karasinska, ... Molecular cancer therapeutics 19 (9), 1889-1897, 2020 | 12 | 2020 |
The Genome of the Steller Sea Lion (Eumetopias jubatus) HH Kwan, L Culibrk, GA Taylor, S Leelakumari, R Tan, SD Jackman, ... Genes 10 (7), 486, 2019 | 7 | 2019 |
Whole-genome and transcriptome analysis of advanced adrenocortical cancer highlights multiple alterations affecting epigenome and DNA repair pathways JM Lavoie, V Csizmok, LM Williamson, L Culibrk, G Wang, MA Marra, ... Molecular Case Studies 8 (3), a006148, 2022 | 6 | 2022 |
The genome of the forest insect pest Pissodes strobi reveals genome expansion and evidence of a Wolbachia endosymbiont KK Gagalova, JGA Whitehill, L Culibrk, D Lin, V Lévesque-Tremblay, ... G3 12 (4), jkac038, 2022 | 6 | 2022 |
Long‐read genome sequencing resolves a complex 13q structural variant associated with syndromic anophthalmia PK Boerkoel, K Dixon, C Fitzsimons, Y Shen, S Huynh, ... American Journal of Medical Genetics Part A 188 (5), 1589-1594, 2022 | 5 | 2022 |
Long-read sequencing of an advanced cancer cohort resolves rearrangements, unravels haplotypes, and reveals methylation landscapes K O'Neill, E Pleasance, J Fan, V Akbari, G Chang, K Dixon, V Csizmok, ... medRxiv, 2024.02. 20.24302959, 2024 | 4 | 2024 |
Comprehensive transcriptome analysis reveals link between epigenetic dysregulation, endogenous retrovirus expression and immunogenicity in metastatic colorectal carcinoma. SR Mendis, JT Topham, E Titmuss, L Williamson, ED Pleasance, ... Journal of Clinical Oncology 37 (15_suppl), 3535-3535, 2019 | 4 | 2019 |
Releasates of riboflavin/UV‐treated platelets: Microvesicles suppress cytokine‐mediated endothelial cell migration/proliferation P Schubert, L Culibrk, B Culibrk, EM Conway, RP Goodrich, DV Devine Transfusion 61 (5), 1551-1561, 2021 | 3 | 2021 |
The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 G Chang, S Jones, S Leelakumari, J Ashkani, L Culibrk, K O'Neill, K Tse, ... F1000Research 12, 2023 | 2 | 2023 |
eP343: long-read genome sequencing informs the molecular etiology of imprinting disorders K Dixon, Y Shen, HL Chin, N Gazzaz, S Huynh, S Chan, C Zhang, ... Genetics in Medicine 24 (3), S214-S215, 2022 | 1 | 2022 |