| Bioinformatic analysis of bacteria and host cell dual RNA-sequencing experiments JW Marsh, RJ Hayward, AC Shetty, A Mahurkar, MS Humphrys, ... Briefings in bioinformatics 19 (6), 1115-1129, 2018 | 27 | 2018 |
| Comprehensive analysis of PNA-based antisense antibiotics targeting various essential genes in uropathogenic Escherichia coli JV Linda Popella, Jakob Jung, Phuong Thao Do, Regan J Hayward, Lars Barquist Nucleic Acids Research 50 (11), 2022 | 20 | 2022 |
| An Integrated Proteomic and Transcriptomic Analysis Reveals the Venom Complexity of the Bullet Ant Paraponera clavata SR Aili, A Touchard, R Hayward, SD Robinson, SS Pineda, H Lalagüe, ... Toxins 12 (5), 324, 2020 | 18 | 2020 |
| Early Transcriptional Landscapes of Chlamydia trachomatis-Infected Epithelial Cells at Single Cell Resolution RJ Hayward, JW Marsh, MS Humphrys, WM Huston, GSA Myers Frontiers in cellular and infection microbiology 9, 392, 2019 | 18 | 2019 |
| SeagrassDB: an open-source transcriptomics landscape for phylogenetically profiled seagrasses and aquatic plants G Sablok, RJ Hayward, PA Davey, RP Santos, M Schliep, A Larkum, ... Scientific reports 8 (1), 2749, 2018 | 17 | 2018 |
| Improved bacterial single-cell RNA-seq through automated MATQ-seq and Cas9-based removal of rRNA reads C Homberger, RJ Hayward, L Barquist, J Vogel Mbio 14 (2), e03557-22, 2023 | 14 | 2023 |
| Dual RNA-seq analysis of in vitro infection multiplicity and RNA depletion methods in Chlamydia-infected epithelial cells RJ Hayward, MS Humphrys, WM Huston, GSA Myers Scientific Reports 11 (1), 10399, 2021 | 9 | 2021 |
| Chromatin accessibility dynamics of Chlamydia-infected epithelial cells RJ Hayward, JW Marsh, MS Humphrys, WM Huston, GSA Myers Epigenetics & chromatin 13, 1-18, 2020 | 8 | 2020 |
| An integrated transcriptomics–functional genomics approach reveals a small RNA that modulates Bacteroides thetaiotaomicron sensitivity to tetracyclines D Ryan, E Bornet, G Prezza, SV Alampalli, TF de Carvalho, H Felchle, ... bioRxiv, 2023 | 3 | 2023 |
| Dual RNA-seq of chlamydia and host cells JW Marsh, RJ Hayward, A Shetty, A Mahurkar, MS Humphrys, GSA Myers Chlamydia trachomatis: Methods and Protocols, 123-135, 2019 | 2 | 2019 |
| Dual RNA-Seq analysis of in vitro infection multiplicity in Chlamydia-infected epithelial cells RJ Hayward, MS Humphrys, WM Huston, GSA Myers bioRxiv, 2020.10. 21.347906, 2020 | | 2020 |
| Bioinformatic analysis of host cell gene expression and chromatin accessibility in response to Chlamydia trachomatis infection RJ Hayward | | 2020 |
| Dual RNA sequencing (dRNA-Seq) of bacteria and their host cells JW Marsh, R Hayward, A Shetty, A Mahurkar, M Humphreys, G Myers Briefings in Bioinformatics, 2018 | | 2018 |
