| Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant discovery F Hanssen, MU Garcia, L Folkersen, AS Pedersen, F Lescai, S Jodoin, ... NAR Genomics and Bioinformatics 6 (2), lqae031, 2024 | 21 | 2024 |
| DACCOR–Detection, characterization, and reconstruction of repetitive regions in bacterial genomes A Seitz, F Hanssen, K Nieselt PeerJ 6, e4742, 2018 | 7 | 2018 |
| The draft whole-genome sequence of the antibiotic producer Empedobacter haloabium ATCC 31962 provides indications for its taxonomic reclassification H Miess, P Arlt, AK Apel, T Weber, K Nieselt, F Hanssen, S Czemmel, ... Microbiology Resource Announcements 8 (45), 10.1128/mra. 01120-19, 2019 | 5 | 2019 |
| NCBench: providing an open, reproducible, transparent, adaptable, and continuous benchmark approach for DNA-sequencing-based variant calling F Hanssen, G Gabernet, F Bäuerle, B Stöcker, F Wiegand, NH Smith, ... F1000Research 12, 1125, 2024 | 3 | 2024 |
| Empowering bioinformatics communities with Nextflow and nf-core BE Langer, A Amaral, MO Baudement, F Bonath, M Charles, PK Chitneedi, ... bioRxiv, 2024.05. 10.592912, 2024 | 3 | 2024 |
| nf-core/airrflow: an adaptive immune receptor repertoire analysis workflow employing the Immcantation framework G Gabernet, S Marquez, R Bjornson, A Peltzer, H Meng, E Aron, NY Lee, ... PLOS Computational Biology 20 (7), e1012265, 2024 | 1 | 2024 |
| Cluster-efficient pangenome graph construction with nf-core/pangenome S Heumos, ML Heuer, F Hanssen, L Heumos, A Guarracino, P Heringer, ... Bioinformatics, btae609, 2024 | | 2024 |
| 1463 The intra-tumoral spatial heterogeneity of T cell antigens in glioblastoma: An integrated multi-omics approach M Wacker, G Medici, M Dubbelaar, J Bauer, A Nelde, F Hanssen, ... Journal for ImmunoTherapy of Cancer 11 (Suppl 1), 2023 | | 2023 |
