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David Colognori
David Colognori
Yale, Harvard, UC Berkeley
在 berkeley.edu 的电子邮件经过验证
标题
引用次数
引用次数
年份
Long noncoding RNAs: past, present, and future
JTY Kung, D Colognori, JT Lee
Genetics 193 (3), 651-669, 2013
20572013
A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation
A Minajigi, JE Froberg, C Wei, H Sunwoo, B Kesner, D Colognori, ...
Science 349 (6245), aab2276, 2015
5002015
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes
BJ Beliveau, AN Boettiger, MS Avendaño, R Jungmann, RB McCole, ...
Nature communications 6 (1), 7147, 2015
3812015
Locus-specific targeting to the X chromosome revealed by the RNA interactome of CTCF
JT Kung, B Kesner, JY An, JY Ahn, C Cifuentes-Rojas, D Colognori, ...
Molecular cell 57 (2), 361-375, 2015
1892015
Xist deletional analysis reveals an interdependency between Xist RNA and polycomb complexes for spreading along the inactive X
D Colognori, H Sunwoo, AJ Kriz, CY Wang, JT Lee
Molecular cell 74 (1), 101-117. e10, 2019
1502019
Repeat E anchors Xist RNA to the inactive X chromosomal compartment through CDKN1A-interacting protein (CIZ1)
H Sunwoo, D Colognori, JE Froberg, Y Jeon, JT Lee
Proceedings of the National Academy of Sciences 114 (40), 10654-10659, 2017
1092017
Human spliceosomal protein CWC22 plays a role in coupling splicing to exon junction complex deposition and nonsense-mediated decay
A Alexandrov, D Colognori, MD Shu, JA Steitz
Proceedings of the National Academy of Sciences 109 (52), 21313-21318, 2012
942012
Human eIF4AIII interacts with an eIF4G-like partner, NOM1, revealing an evolutionarily conserved function outside the exon junction complex
A Alexandrov, D Colognori, JA Steitz
Genes & development 25 (10), 1078-1090, 2011
722011
PRC1 collaborates with SMCHD1 to fold the X-chromosome and spread Xist RNA between chromosome compartments
CY Wang, D Colognori, H Sunwoo, D Wang, JT Lee
Nature communications 10 (1), 2950, 2019
702019
Xist RNA antagonizes the SWI/SNF chromatin remodeler BRG1 on the inactive X chromosome
T Jégu, R Blum, JC Cochrane, L Yang, CY Wang, ME Gilles, D Colognori, ...
Nature structural & molecular biology 26 (2), 96-109, 2019
612019
Allelic imbalance is a prevalent and tissue-specific feature of the mouse transcriptome
SF Pinter, D Colognori, BJ Beliveau, RI Sadreyev, B Payer, E Yildirim, ...
Genetics 200 (2), 537-549, 2015
532015
Xist repeats A and B account for two distinct phases of X inactivation establishment
D Colognori, H Sunwoo, D Wang, CY Wang, JT Lee
Developmental cell 54 (1), 21-32. e5, 2020
422020
Precise transcript targeting by CRISPR-Csm complexes
D Colognori, M Trinidad, JA Doudna
Nature biotechnology 41 (9), 1256-1264, 2023
362023
Balancing cohesin eviction and retention prevents aberrant chromosomal interactions, Polycomb-mediated repression, and X-inactivation
AJ Kriz, D Colognori, H Sunwoo, B Nabet, JT Lee
Molecular cell 81 (9), 1970-1987. e9, 2021
362021
Decorating chromatin for enhanced genome editing using CRISPR-Cas9
E Chen, E Lin-Shiao, M Trinidad, M Saffari Doost, D Colognori, ...
Proceedings of the National Academy of Sciences 119 (49), e2204259119, 2022
222022
Genome-wide identification of autosomal genes with allelic imbalance of chromatin state
AJ Savol, PI Wang, Y Jeon, D Colognori, E Yildirim, SF Pinter, B Payer, ...
PloS one 12 (8), e0182568, 2017
92017
CasPEDIA Database: a functional classification system for class 2 CRISPR-Cas enzymes
BA Adler, MI Trinidad, D Bellieny-Rabelo, E Zhang, HM Karp, ...
Nucleic acids research 52 (D1), D590-D596, 2024
52024
Xist repeat A contributes to early recruitment of polycomb complexes during X-chromosome inactivation
D Colognori, H Sunwoo, D Wang, CY Wang, JT Lee
Developmental Cell 56 (9), 1236-1237, 2021
52021
Genome-wide Characterization of Diverse Bacteriophages Enabled by RNA-Binding CRISPRi
BA Adler, MJ Al-Shimary, JR Patel, E Ambruster, D Colognori, EJ Charles, ...
bioRxiv, 2023.09. 18.558157, 2023
42023
Dissection of Xist Functional Elements Involved in X-Chromosome Inactivation
DA Colognori
Harvard University, 2019
22019
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